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The map label for this gene is fliY [H]

Identifier: 15888714

GI number: 15888714

Start: 1382203

End: 1382988

Strand: Direct

Name: fliY [H]

Synonym: Atu1388

Alternate gene names: 15888714

Gene position: 1382203-1382988 (Clockwise)

Preceding gene: 15888713

Following gene: 15888715

Centisome position: 48.64

GC content: 58.65

Gene sequence:

>786_bases
ATGTTTTCCAGACGTTTATTGCTCGCCATCGCCGCTGTTTCCGTAACGCTTGGTTTTTCGCCCGCAGCCTTTGCCGATGC
GCTTGGCGATATTTCCTCGCGCGGCACGATCCGTGTTGCGGTCCCGCAGGATTTCCCGCCCTTCGGTAGCGTCGGCACGG
ATATGGCGCCGCAGGGTTATGATATCGACGTTGCCAATCTGATCGGCGAGAAGCTTGGCGTGAAGGTCGAGCTGGTGCCG
GTCACAAGCGCCAACCGCGTTCCCTATCTGCAGACCAACAAGGTCGACCTCGTCATCTCGAGCCTCGGCAAGAACCCGGA
CCGTGAAAAGGTCATCGACTTCTCCACCGCCTACGCGCCCTTCTTCAACGGCGTCTTTGCACCGGACTCGGTTACTGTGG
CCAAGGCGGAAGATCTATCGGGCAAGACCATCGGCGTTACCCGTGGCGCCGTCGAGGATTTGGAACTGACCAAGGTTGCT
CCGGCCGACACGACTATCAAGCGTTATGAAGACAATAACGGCACCATCTCCGCCTTCCTCGCCGGCCAGGTGGAAGCCGT
GGCAACGGGCAATGTCGTGGCCGCCGCCATTTTGGCCAAGAACCCGCCGAAGCGCCCCGAGCTGAAATTCCTGATCAAGA
ATTCGCCCTGCTATATCGGCCTGAACAAGGAGCAGCCGGCGCTACTGGAAAAGGTCAACGCCATCATCGCGACTGCAAAG
ACCGATGGTTCGCTGAACACGATCGCGCAGAAGTGGCTGAAAACCGATCTTCCGAAGGATCTCTGA

Upstream 100 bases:

>100_bases
AACCGGACTCGATCTCACCCGCAGGCCGGACCCGCTTTATGAGCTCCGCAACTCCCTTTCATTGCAGCCTCTTTTCTCAA
GCCCCAAGGAGTAGTCTCCC

Downstream 100 bases:

>100_bases
CCAACCTGGCAAATCCATGCGCTGGCCGTGTCTGATCCCGGCCCGGCGCGTGGTTTGTCCTCCCCGAAAGGAAATATCGG
GTGAAATACACATTCGATTT

Product: ABC transporter, substrate binding protein (amino acid)

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MFSRRLLLAIAAVSVTLGFSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGYDIDVANLIGEKLGVKVELVP
VTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSTAYAPFFNGVFAPDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVA
PADTTIKRYEDNNGTISAFLAGQVEAVATGNVVAAAILAKNPPKRPELKFLIKNSPCYIGLNKEQPALLEKVNAIIATAK
TDGSLNTIAQKWLKTDLPKDL

Sequences:

>Translated_261_residues
MFSRRLLLAIAAVSVTLGFSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGYDIDVANLIGEKLGVKVELVP
VTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSTAYAPFFNGVFAPDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVA
PADTTIKRYEDNNGTISAFLAGQVEAVATGNVVAAAILAKNPPKRPELKFLIKNSPCYIGLNKEQPALLEKVNAIIATAK
TDGSLNTIAQKWLKTDLPKDL
>Mature_261_residues
MFSRRLLLAIAAVSVTLGFSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGYDIDVANLIGEKLGVKVELVP
VTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSTAYAPFFNGVFAPDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVA
PADTTIKRYEDNNGTISAFLAGQVEAVATGNVVAAAILAKNPPKRPELKFLIKNSPCYIGLNKEQPALLEKVNAIIATAK
TDGSLNTIAQKWLKTDLPKDL

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=265, Percent_Identity=27.1698113207547, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1787085, Length=264, Percent_Identity=25.7575757575758, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788648, Length=231, Percent_Identity=26.4069264069264, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787088, Length=226, Percent_Identity=23.0088495575221, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788649, Length=268, Percent_Identity=25, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 27671; Mature: 27671

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRRLLLAIAAVSVTLGFSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGY
CCCHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
DIDVANLIGEKLGVKVELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSTAYAP
CEEHHHHHHHHHCCEEEEEEECCCCCCCEEECCCCEEEEEHHCCCCCHHHEEECHHHHHH
FFNGVFAPDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVAPADTTIKRYEDNNGTISAFL
HHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEECCCCEEEEEE
AGQVEAVATGNVVAAAILAKNPPKRPELKFLIKNSPCYIGLNKEQPALLEKVNAIIATAK
ECCEEEEECCCCEEEHHHHCCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHEEEEC
TDGSLNTIAQKWLKTDLPKDL
CCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFSRRLLLAIAAVSVTLGFSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGY
CCCHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
DIDVANLIGEKLGVKVELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSTAYAP
CEEHHHHHHHHHCCEEEEEEECCCCCCCEEECCCCEEEEEHHCCCCCHHHEEECHHHHHH
FFNGVFAPDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVAPADTTIKRYEDNNGTISAFL
HHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEECCCCEEEEEE
AGQVEAVATGNVVAAAILAKNPPKRPELKFLIKNSPCYIGLNKEQPALLEKVNAIIATAK
ECCEEEEECCCCEEEHHHHCCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHEEEEC
TDGSLNTIAQKWLKTDLPKDL
CCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]