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The map label for this gene is ntaR [H]

Identifier: 15888713

GI number: 15888713

Start: 1381486

End: 1382196

Strand: Direct

Name: ntaR [H]

Synonym: Atu1387

Alternate gene names: 15888713

Gene position: 1381486-1382196 (Clockwise)

Preceding gene: 15888712

Following gene: 15888714

Centisome position: 48.62

GC content: 59.77

Gene sequence:

>711_bases
ATGCAAGATAGCCATACATCCGAAAGCGCCCAGAGCGCGGTAGAAGACGCCATCATCTCAGGCATTCTTTCCGCGCGCAT
CCGTCCGGGAACCCGCCTCAGCGAGAACCAGCTCGCCAGCCTTTTCAGCGTGTCGCGCACGCGCATCCGCGAGGCGATGA
TGCGGCTTGAGACGCGCGGCATCGTCACCGTCAGCCCGCGTCGCGGCTGGTTCGTGGTGGAGCCTTCCGCTGAAGAATCC
ATCAAGGTCTATGAGGCGCGCCGCATCATTGAATATGGGCTCTTACGCAATCTTTCCACGGTGAGCGCGCAAGGCATTGC
GCTGCTTGCCGATCATCTCGATGAGGAGAAGGCGGCAATTGCCAAAGGTGATCGCCAGCGCCTGACTTGCCTGATGGGTG
ATTTTCACATCCGCATCGCTGAAATCGCCGGAAACGACATCATTGTCGAAGCGCTGCGTGACCTGACGGCCAGAACCATC
CGCATCTCCATGCTCTATCAGTCCGACTTCCATGCGCAGCAATCGCATGACGGGCACTGCCGCATCTTCGAGGCGATCAG
GGCGGCCGATTTCCATGCCGCCGCCGAACTCGCCATCCGCCATCTCGACGAAGTCGAAACCGGACTCGATCTCACCCGCA
GGCCGGACCCGCTTTATGAGCTCCGCAACTCCCTTTCATTGCAGCCTCTTTTCTCAAGCCCCAAGGAGTAG

Upstream 100 bases:

>100_bases
GTTTTAGCGCATTTGATTGCTAGGGCGGCAAGCCGCTGATCATCAGAGGCCCGCGAGCCGTTAAATTTTCGTCTGGCACG
GCTCTTGCTTTCAATCTTGT

Downstream 100 bases:

>100_bases
TCTCCCATGTTTTCCAGACGTTTATTGCTCGCCATCGCCGCTGTTTCCGTAACGCTTGGTTTTTCGCCCGCAGCCTTTGC
CGATGCGCTTGGCGATATTT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MQDSHTSESAQSAVEDAIISGILSARIRPGTRLSENQLASLFSVSRTRIREAMMRLETRGIVTVSPRRGWFVVEPSAEES
IKVYEARRIIEYGLLRNLSTVSAQGIALLADHLDEEKAAIAKGDRQRLTCLMGDFHIRIAEIAGNDIIVEALRDLTARTI
RISMLYQSDFHAQQSHDGHCRIFEAIRAADFHAAAELAIRHLDEVETGLDLTRRPDPLYELRNSLSLQPLFSSPKE

Sequences:

>Translated_236_residues
MQDSHTSESAQSAVEDAIISGILSARIRPGTRLSENQLASLFSVSRTRIREAMMRLETRGIVTVSPRRGWFVVEPSAEES
IKVYEARRIIEYGLLRNLSTVSAQGIALLADHLDEEKAAIAKGDRQRLTCLMGDFHIRIAEIAGNDIIVEALRDLTARTI
RISMLYQSDFHAQQSHDGHCRIFEAIRAADFHAAAELAIRHLDEVETGLDLTRRPDPLYELRNSLSLQPLFSSPKE
>Mature_236_residues
MQDSHTSESAQSAVEDAIISGILSARIRPGTRLSENQLASLFSVSRTRIREAMMRLETRGIVTVSPRRGWFVVEPSAEES
IKVYEARRIIEYGLLRNLSTVSAQGIALLADHLDEEKAAIAKGDRQRLTCLMGDFHIRIAEIAGNDIIVEALRDLTARTI
RISMLYQSDFHAQQSHDGHCRIFEAIRAADFHAAAELAIRHLDEVETGLDLTRRPDPLYELRNSLSLQPLFSSPKE

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=188, Percent_Identity=27.1276595744681, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26447; Mature: 26447

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSHTSESAQSAVEDAIISGILSARIRPGTRLSENQLASLFSVSRTRIREAMMRLETRG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
IVTVSPRRGWFVVEPSAEESIKVYEARRIIEYGLLRNLSTVSAQGIALLADHLDEEKAAI
EEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHH
AKGDRQRLTCLMGDFHIRIAEIAGNDIIVEALRDLTARTIRISMLYQSDFHAQQSHDGHC
HCCCHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCH
RIFEAIRAADFHAAAELAIRHLDEVETGLDLTRRPDPLYELRNSLSLQPLFSSPKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQDSHTSESAQSAVEDAIISGILSARIRPGTRLSENQLASLFSVSRTRIREAMMRLETRG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
IVTVSPRRGWFVVEPSAEESIKVYEARRIIEYGLLRNLSTVSAQGIALLADHLDEEKAAI
EEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHH
AKGDRQRLTCLMGDFHIRIAEIAGNDIIVEALRDLTARTIRISMLYQSDFHAQQSHDGHC
HCCCHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCH
RIFEAIRAADFHAAAELAIRHLDEVETGLDLTRRPDPLYELRNSLSLQPLFSSPKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA