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The map label for this gene is dppC [H]

Identifier: 15888535

GI number: 15888535

Start: 1191521

End: 1192426

Strand: Direct

Name: dppC [H]

Synonym: Atu1199

Alternate gene names: 15888535

Gene position: 1191521-1192426 (Clockwise)

Preceding gene: 15888534

Following gene: 15888536

Centisome position: 41.93

GC content: 60.04

Gene sequence:

>906_bases
ATGACCACTAGTCTTTTCCCGAGCGCGCCTGCCGCCGCCATGCCCATGACCTTGCCCACACGCCCGTCGACACTCTCCCG
GTTCACGGATTTCATCCGCCGGCGGCACTGGACCTTCTATGCGGGATCGGCAATTTTTCTCGCCATCGTCCTGCTCCTGG
TGATCGCGCCCTGGATTTCGCCCTATAATCCGGCACAGCAGAACCTTCGCCTCAGGCTGAATGCGCCGAGCGCCACCTAT
TGGCTTGGAACAGATCATCTCGGTCGCGATGTCCTGAGCCGGCTCTTGATCGGCGGCCGTTTCACAGTCACGATCGCCGC
TATCACTGTCATTCTGTCGGTCGGTATTGGAACCTTCATCGGCATCATCAGCGGCCGCAGCCGCGGTATCCTCGATGAAG
TGCTGATGCGCGTGGTCGATCTGCTTATCGCCATACCCGATGTGGTGATTGCGATTTTCCTGGTCGCCATCTTTGGTCCC
GGATACGGAACGTTGATCGCGTCGCTAACGATCGTCGGCTGGACGCCTTTTGCGCGGTTGGCGCGGGGACTGACGCTCGC
GATCAATTCCCGCGAATATATCCGCGCCGCGGAGGTGCTAGGCTGCACGCGGCGCTTCATCATCTTCCGGCATATCATTC
CCAATACGATCTGGCCGATCGCGGCCGTGGCGTTCCTGCGATTTGGCCACAAGCTGATCACAGTAGGCGGTTTGTCATTC
CTGGGGCTCGGCGTGCAGCCGCCGGCCGCCGACTGGGCGCTGATGCTGTCAGATGCACAGGCCTATGCCGAGCGCATGCC
AATTCTCGTCATCGCACCGGGTCTCGCGATCTTCCTGTCGGCACTCAGCGTGACGTGGATCGGCCATGGCCTCAACCTGG
AAACGAAGAAAACGAACAATCATTGA

Upstream 100 bases:

>100_bases
CTGCAGGGCGGTTTCATCTGCATCGTGGCCCTGTCCATCCTGGTCAATACCCTGGCCGACAGCTTCTATGTTCTGATCAA
TCCAGCCATGCGAGGTCAAC

Downstream 100 bases:

>100_bases
TGCCTGCAAACAGGCAAGGACAGATTTGACTAATGTCAAACATAGATGAGGCCGCAGGGCCGGAAGGAGAGTAATATCGT
CTGAAGCCGCATGAATACGC

Product: ABC transporter, membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTTSLFPSAPAAAMPMTLPTRPSTLSRFTDFIRRRHWTFYAGSAIFLAIVLLLVIAPWISPYNPAQQNLRLRLNAPSATY
WLGTDHLGRDVLSRLLIGGRFTVTIAAITVILSVGIGTFIGIISGRSRGILDEVLMRVVDLLIAIPDVVIAIFLVAIFGP
GYGTLIASLTIVGWTPFARLARGLTLAINSREYIRAAEVLGCTRRFIIFRHIIPNTIWPIAAVAFLRFGHKLITVGGLSF
LGLGVQPPAADWALMLSDAQAYAERMPILVIAPGLAIFLSALSVTWIGHGLNLETKKTNNH

Sequences:

>Translated_301_residues
MTTSLFPSAPAAAMPMTLPTRPSTLSRFTDFIRRRHWTFYAGSAIFLAIVLLLVIAPWISPYNPAQQNLRLRLNAPSATY
WLGTDHLGRDVLSRLLIGGRFTVTIAAITVILSVGIGTFIGIISGRSRGILDEVLMRVVDLLIAIPDVVIAIFLVAIFGP
GYGTLIASLTIVGWTPFARLARGLTLAINSREYIRAAEVLGCTRRFIIFRHIIPNTIWPIAAVAFLRFGHKLITVGGLSF
LGLGVQPPAADWALMLSDAQAYAERMPILVIAPGLAIFLSALSVTWIGHGLNLETKKTNNH
>Mature_300_residues
TTSLFPSAPAAAMPMTLPTRPSTLSRFTDFIRRRHWTFYAGSAIFLAIVLLLVIAPWISPYNPAQQNLRLRLNAPSATYW
LGTDHLGRDVLSRLLIGGRFTVTIAAITVILSVGIGTFIGIISGRSRGILDEVLMRVVDLLIAIPDVVIAIFLVAIFGPG
YGTLIASLTIVGWTPFARLARGLTLAINSREYIRAAEVLGCTRRFIIFRHIIPNTIWPIAAVAFLRFGHKLITVGGLSFL
GLGVQPPAADWALMLSDAQAYAERMPILVIAPGLAIFLSALSVTWIGHGLNLETKKTNNH

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=284, Percent_Identity=35.9154929577465, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787760, Length=281, Percent_Identity=31.6725978647687, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1789889, Length=248, Percent_Identity=33.0645161290323, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1789964, Length=245, Percent_Identity=40, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1787498, Length=264, Percent_Identity=32.1969696969697, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1787549, Length=258, Percent_Identity=32.1705426356589, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1788505, Length=172, Percent_Identity=33.1395348837209, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32778; Mature: 32647

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSLFPSAPAAAMPMTLPTRPSTLSRFTDFIRRRHWTFYAGSAIFLAIVLLLVIAPWIS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCC
PYNPAQQNLRLRLNAPSATYWLGTDHLGRDVLSRLLIGGRFTVTIAAITVILSVGIGTFI
CCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GIISGRSRGILDEVLMRVVDLLIAIPDVVIAIFLVAIFGPGYGTLIASLTIVGWTPFARL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH
ARGLTLAINSREYIRAAEVLGCTRRFIIFRHIIPNTIWPIAAVAFLRFGHKLITVGGLSF
HCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHEEECCHHH
LGLGVQPPAADWALMLSDAQAYAERMPILVIAPGLAIFLSALSVTWIGHGLNLETKKTNN
HCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCEECCCCCC
H
C
>Mature Secondary Structure 
TTSLFPSAPAAAMPMTLPTRPSTLSRFTDFIRRRHWTFYAGSAIFLAIVLLLVIAPWIS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCC
PYNPAQQNLRLRLNAPSATYWLGTDHLGRDVLSRLLIGGRFTVTIAAITVILSVGIGTFI
CCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GIISGRSRGILDEVLMRVVDLLIAIPDVVIAIFLVAIFGPGYGTLIASLTIVGWTPFARL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH
ARGLTLAINSREYIRAAEVLGCTRRFIIFRHIIPNTIWPIAAVAFLRFGHKLITVGGLSF
HCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHEEECCHHH
LGLGVQPPAADWALMLSDAQAYAERMPILVIAPGLAIFLSALSVTWIGHGLNLETKKTNN
HCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCEECCCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]