Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15888528
Identifier: 15888528
GI number: 15888528
Start: 1183411
End: 1183728
Strand: Direct
Name: 15888528
Synonym: Atu1191
Alternate gene names: NA
Gene position: 1183411-1183728 (Clockwise)
Preceding gene: 15888527
Following gene: 159184659
Centisome position: 41.65
GC content: 60.69
Gene sequence:
>318_bases ATGTCACCCACTATTGAGTTTCGCGGCACCTATGGGACGTTCAAGGTGGACGCGCTCTCGGGCCTCGTGGTCGAACAGTC GCCAGACTGGGACGAGATCAACGCGGAAGGCGGTCCCGGCTACACGGACATCATCAAGGTCGATCTGGCCGAGCGCCGCG CATGGTACGCCGCAAGGGGTGTCCAACTCCCCGAAATCCAGCCGGACGGTGACATTCTGGATGTCGCGTTTTGGGACCAA GACTTGACCTATTGCAGCGCCGAGGACGATTGGCGGGAAGAGATCATGTTGGCCCGGTATGGGGCAGACGCAGCATGA
Upstream 100 bases:
>100_bases ATGTGGAAAGTAATGCGAAACCGGGTGTCGCTTCGGCTGGCCTCCGGTCGTCCTAGGGTCGCGCCTAGGGCCTGATGAGC AGCGCACGAAAGGAAATCCA
Downstream 100 bases:
>100_bases CATTCGACGCCAGCCTCTTCCTGCTTTTCATGGGCTGGAGCGCGCTGACCCTCGGGTGCGCCGTCTGGTTCTCCAAACAA TCCAACTGATACCGAAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSPTIEFRGTYGTFKVDALSGLVVEQSPDWDEINAEGGPGYTDIIKVDLAERRAWYAARGVQLPEIQPDGDILDVAFWDQ DLTYCSAEDDWREEIMLARYGADAA
Sequences:
>Translated_105_residues MSPTIEFRGTYGTFKVDALSGLVVEQSPDWDEINAEGGPGYTDIIKVDLAERRAWYAARGVQLPEIQPDGDILDVAFWDQ DLTYCSAEDDWREEIMLARYGADAA >Mature_104_residues SPTIEFRGTYGTFKVDALSGLVVEQSPDWDEINAEGGPGYTDIIKVDLAERRAWYAARGVQLPEIQPDGDILDVAFWDQD LTYCSAEDDWREEIMLARYGADAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11749; Mature: 11618
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTIEFRGTYGTFKVDALSGLVVEQSPDWDEINAEGGPGYTDIIKVDLAERRAWYAARG CCCCEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCC VQLPEIQPDGDILDVAFWDQDLTYCSAEDDWREEIMLARYGADAA CCCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHEEEHCCCCCCC >Mature Secondary Structure SPTIEFRGTYGTFKVDALSGLVVEQSPDWDEINAEGGPGYTDIIKVDLAERRAWYAARG CCCEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCC VQLPEIQPDGDILDVAFWDQDLTYCSAEDDWREEIMLARYGADAA CCCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHEEEHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA