Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888426
Identifier: 15888426
GI number: 15888426
Start: 1074272
End: 1074574
Strand: Direct
Name: 15888426
Synonym: Atu1083
Alternate gene names: NA
Gene position: 1074272-1074574 (Clockwise)
Preceding gene: 15888425
Following gene: 159184606
Centisome position: 37.81
GC content: 66.67
Gene sequence:
>303_bases ATGACGCTCGATCCGAACACGCTCCTGACGATCCTCGCCATGATGGCGGCAACTGTTACAACGCGCCTTGGCGGCCTGCT GCTGGTCAGTCATTTCACCCTGACGCCGCGTCTGAAAAAGGCGCTCGGCGTGGTGCCGCCTGCCGTCCTGATGGCCGTGG TCACGCCGACTGCACTCGCCAGCGGGGCGGCCGAAACTATCGCCTGCGCGGTAACGGCAATCGCGGCGCTGCGGCTCAGC CTGCTGCCGGCCGCCACGCTCGGCGTCGTCACCGTGGCGTTGCTGCGCGGAATCGGATTGTAA
Upstream 100 bases:
>100_bases CCCACGCGCTGGTCCCGGGCGCCTGGTATATCGCCGCCGGCGCGATGGCGGGGCTTGCGGTCGCCGCCTTCGGCCGTGCG GAACAGGTGGAGCAGCCGGC
Downstream 100 bases:
>100_bases GAAAATCGCGCCAACGTCCTGAAAAGACTCCGGACTCGGCGTCTGTAATGCGAAGCGGGCAGCGGGGGTGAAAATATGTC ACCCTCGCTGTGTTTTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MTLDPNTLLTILAMMAATVTTRLGGLLLVSHFTLTPRLKKALGVVPPAVLMAVVTPTALASGAAETIACAVTAIAALRLS LLPAATLGVVTVALLRGIGL
Sequences:
>Translated_100_residues MTLDPNTLLTILAMMAATVTTRLGGLLLVSHFTLTPRLKKALGVVPPAVLMAVVTPTALASGAAETIACAVTAIAALRLS LLPAATLGVVTVALLRGIGL >Mature_99_residues TLDPNTLLTILAMMAATVTTRLGGLLLVSHFTLTPRLKKALGVVPPAVLMAVVTPTALASGAAETIACAVTAIAALRLSL LPAATLGVVTVALLRGIGL
Specific function: Unknown
COG id: COG4541
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10027; Mature: 9896
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDPNTLLTILAMMAATVTTRLGGLLLVSHFTLTPRLKKALGVVPPAVLMAVVTPTALA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH SGAAETIACAVTAIAALRLSLLPAATLGVVTVALLRGIGL HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLDPNTLLTILAMMAATVTTRLGGLLLVSHFTLTPRLKKALGVVPPAVLMAVVTPTALA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH SGAAETIACAVTAIAALRLSLLPAATLGVVTVALLRGIGL HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA