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The map label for this gene is slyA [H]

Identifier: 159184606

GI number: 159184606

Start: 1076483

End: 1076938

Strand: Direct

Name: slyA [H]

Synonym: Atu1085

Alternate gene names: 159184606

Gene position: 1076483-1076938 (Clockwise)

Preceding gene: 15888426

Following gene: 159184607

Centisome position: 37.88

GC content: 60.75

Gene sequence:

>456_bases
ATGTCCCGCGAGACCGACAAGGAGCAGCTTCTGGATGAAGTCTCCGCTTTCACCCGCAAACTGCGCGCGTTTTTCGATGC
GCGGGTAGGGGAAAGCGGCCTGACGCTTGCCCGTGCGCGGGCGCTTTTTGCGCTCTCACGGCGCGGTCCGCTGACGCAGA
CGGAACTTGCCGAGGAAATGGAAATCGAAACCCCGACGCTGGTGCGGGTGCTTGACGGCATGGAGAAACAGAACCTTATC
GAACGCCGCTCCGATGAGAACGACCGCCGCGCCAAGCGCATCCATATGACTGAAGAAGGTGAGAAGACTTCGGGCACGGT
GCAGGCGGTGGCAAAGTCGCTGCGTTCGGAAATCACCGCCGATATTTCGTCTGAAGATCTGGCCATGGCGCTCGACGTGA
TGCGCCGCCTTTCGGCCAATCTGCAAAACCTCGCAGCCGGGAGGGCACAATCGTGA

Upstream 100 bases:

>100_bases
ACCGCATGGCAGACCCGGCATGAAAGAAACTTGAAAATCGTCAGGCTTAAGAATAAATAGGCAGAAAATAAGTAGTGTGC
TAATTATAAGGCTTACTGAC

Downstream 100 bases:

>100_bases
GCAGCACATTGCCGCAGACCACAGGCGATGCCACTTCCCAAAATACCGAGGTGACCGCCAAATCCTCCGAGCTTCCGGAA
AAGGACGCGACTGTACCGCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSRETDKEQLLDEVSAFTRKLRAFFDARVGESGLTLARARALFALSRRGPLTQTELAEEMEIETPTLVRVLDGMEKQNLI
ERRSDENDRRAKRIHMTEEGEKTSGTVQAVAKSLRSEITADISSEDLAMALDVMRRLSANLQNLAAGRAQS

Sequences:

>Translated_151_residues
MSRETDKEQLLDEVSAFTRKLRAFFDARVGESGLTLARARALFALSRRGPLTQTELAEEMEIETPTLVRVLDGMEKQNLI
ERRSDENDRRAKRIHMTEEGEKTSGTVQAVAKSLRSEITADISSEDLAMALDVMRRLSANLQNLAAGRAQS
>Mature_150_residues
SRETDKEQLLDEVSAFTRKLRAFFDARVGESGLTLARARALFALSRRGPLTQTELAEEMEIETPTLVRVLDGMEKQNLIE
RRSDENDRRAKRIHMTEEGEKTSGTVQAVAKSLRSEITADISSEDLAMALDVMRRLSANLQNLAAGRAQS

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081950, Length=131, Percent_Identity=35.8778625954198, Blast_Score=77, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16894; Mature: 16763

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRETDKEQLLDEVSAFTRKLRAFFDARVGESGLTLARARALFALSRRGPLTQTELAEEM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
EIETPTLVRVLDGMEKQNLIERRSDENDRRAKRIHMTEEGEKTSGTVQAVAKSLRSEITA
CCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
DISSEDLAMALDVMRRLSANLQNLAAGRAQS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SRETDKEQLLDEVSAFTRKLRAFFDARVGESGLTLARARALFALSRRGPLTQTELAEEM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
EIETPTLVRVLDGMEKQNLIERRSDENDRRAKRIHMTEEGEKTSGTVQAVAKSLRSEITA
CCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
DISSEDLAMALDVMRRLSANLQNLAAGRAQS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA