Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888414
Identifier: 15888414
GI number: 15888414
Start: 1063393
End: 1063866
Strand: Reverse
Name: 15888414
Synonym: Atu1071
Alternate gene names: NA
Gene position: 1063866-1063393 (Counterclockwise)
Preceding gene: 159184604
Following gene: 15888413
Centisome position: 37.44
GC content: 61.81
Gene sequence:
>474_bases ATGACCACCCACACCGGCGGATGCCAATGCGGCGCGGTCCGTTTTCGCGCCACGGGCGACCTGCAAGACAGCTCCATCTG TCACTGCCGCATGTGCCAGAAGGCCTTCGGTGCCTATTACGCGCCGCTCGTTTCGGTGCGCAACGTGGAATTCGAATGGA CGCGCGGCGAGCCGAAACGGTTTCAATCCTCCAGTGTCGTCAAACGCGGTTTCTGCCCGGAATGCGGCACGCCGCTGACC TATGAGGCACCGGATGGCGTGGCGGTTGCGGCCGGCGCGTTTGACGATCCAGCAGCCCTGCCGCCAACCATTCAATGGGG CGTGGAACGCAAGATCGATTTCGTCGACACGCTTCACACCCTGCCCGCCGTCGCCACCGAGGACGACCTGACGCAGGTAG ACTATCTCACCAACCTCGTTTCCTACCAGCATCCCGACCACGACACTGAAAACTGGCCACCGGAGAAAAGATAA
Upstream 100 bases:
>100_bases AACTAGGCTGGACCGTCCTCCGTTTCTGGAACGATGATATCCTCAAAGACATCGACAACGTCTGTCTCCACATTATCCGA ACGGCAGAGGAGAACCAACC
Downstream 100 bases:
>100_bases TGAGTGAAAAAGGGTTTTCCGGCGGCTGCCAATGTGGTGCCGTGCGGTTCCATGCGGGCAAACTCGGCCGGCCCTCCATC TGCCATTGCCGCATGTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTTHTGGCQCGAVRFRATGDLQDSSICHCRMCQKAFGAYYAPLVSVRNVEFEWTRGEPKRFQSSSVVKRGFCPECGTPLT YEAPDGVAVAAGAFDDPAALPPTIQWGVERKIDFVDTLHTLPAVATEDDLTQVDYLTNLVSYQHPDHDTENWPPEKR
Sequences:
>Translated_157_residues MTTHTGGCQCGAVRFRATGDLQDSSICHCRMCQKAFGAYYAPLVSVRNVEFEWTRGEPKRFQSSSVVKRGFCPECGTPLT YEAPDGVAVAAGAFDDPAALPPTIQWGVERKIDFVDTLHTLPAVATEDDLTQVDYLTNLVSYQHPDHDTENWPPEKR >Mature_156_residues TTHTGGCQCGAVRFRATGDLQDSSICHCRMCQKAFGAYYAPLVSVRNVEFEWTRGEPKRFQSSSVVKRGFCPECGTPLTY EAPDGVAVAAGAFDDPAALPPTIQWGVERKIDFVDTLHTLPAVATEDDLTQVDYLTNLVSYQHPDHDTENWPPEKR
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17382; Mature: 17250
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHTGGCQCGAVRFRATGDLQDSSICHCRMCQKAFGAYYAPLVSVRNVEFEWTRGEPKR CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHH FQSSSVVKRGFCPECGTPLTYEAPDGVAVAAGAFDDPAALPPTIQWGVERKIDFVDTLHT HCCHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHH LPAVATEDDLTQVDYLTNLVSYQHPDHDTENWPPEKR HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TTHTGGCQCGAVRFRATGDLQDSSICHCRMCQKAFGAYYAPLVSVRNVEFEWTRGEPKR CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHH FQSSSVVKRGFCPECGTPLTYEAPDGVAVAAGAFDDPAALPPTIQWGVERKIDFVDTLHT HCCHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHH LPAVATEDDLTQVDYLTNLVSYQHPDHDTENWPPEKR HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA