Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888260
Identifier: 15888260
GI number: 15888260
Start: 910342
End: 911262
Strand: Direct
Name: 15888260
Synonym: Atu8087
Alternate gene names: NA
Gene position: 910342-911262 (Clockwise)
Preceding gene: 159184529
Following gene: 159184530
Centisome position: 32.04
GC content: 64.06
Gene sequence:
>921_bases ATGGTGACGATGGCCCCGCGAAAGCGAAAATCGCCTAAGAAAACAACGGCCCAGATCGGCGCCGGATTTGTTTCCTTGGT GGTTTCGGCCATCGGGCGCGAAATCCTGCGCCATCCGAAACTGGTCGGCGGCTGCGGTGCCTTTGCGGTCGTCTTCGGTT TTGTCGCCGCCAATGCGCTCTGGTATCAGCCGGGCGTCCACCCGACGCCCTTCCTGCGCACGCGCGATGCGGAAAACCCG AACGGCATTGCCGGTTATCGTCCCACCGAACCGCTCGGCACCCACGGCAACGTCACCACCTTCCGTATAGAGCGGCCGGC GGAAAACGAGACGGCGCAGCCTCCGGCCGCCGCGGAAACCGCGGCACTTCCCGCCGCCGACAGCCAGAAGCCGCAGCAGA TCGTCGCCGATATTCAGGCTGAGCTGAAGAAGCGTGGGCTCTATGAAGGCGACGCGGATGGCCGCATGGGGCCGAAGACC GCCGCCGCCATCATGTTCTTCGAGGAAACGCTGGGCATGGAGCAGACCGGCGAGCCAACGACCCGGGTGCTGGCGGCGCT GAAGATCGATGGCGCGACCGTTGCCGCGATCCCGAAAGACCGGCCTTCCGACACCAGCGGCGGCGTCGAGATCGATCCCG TGGCAGCTGCCATCCGCAAGGCGGAGGCTCCGCGCCCGAAAGCCGAGCCGGCCTCCCTCAACACTTCGGCCAATGCCGCA AAGCCCGCAAGCCGCGACCTGATCTCCAGGATCCAGCAGGGGCTGATCAATATCGCTTATGCCGATGTGAAAGTGGACGG TGTGGCGGGGCAACAGACCCGCAATGCTATCAGGGCGTTTGAGAAACATTATCGCTTGCCGGAAACCGGCGAGCCGAGTG AGGTTGTGCTGAAGAAGTTGAAGTCGATCGGGGCGCTTTAG
Upstream 100 bases:
>100_bases GGCATGGTAGGTGGCGGTGAAAACGCTGAAACCGAATGCATGGTGGAATTCCCGCCGCGCATCCGCCAACTCGGCGACAT GGCTGCGAAGATGAAGAAGG
Downstream 100 bases:
>100_bases ATTTAAGCTTCCAGAGTGTTGACGGCGGACCAAGGGTGCGCGGGGCTTTACCCCCCTCTGCCCTGCCGGGCATCTCCCCC TCAAGGAGGGAGATCGATAT
Product: putative peptidoglycan binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MVTMAPRKRKSPKKTTAQIGAGFVSLVVSAIGREILRHPKLVGGCGAFAVVFGFVAANALWYQPGVHPTPFLRTRDAENP NGIAGYRPTEPLGTHGNVTTFRIERPAENETAQPPAAAETAALPAADSQKPQQIVADIQAELKKRGLYEGDADGRMGPKT AAAIMFFEETLGMEQTGEPTTRVLAALKIDGATVAAIPKDRPSDTSGGVEIDPVAAAIRKAEAPRPKAEPASLNTSANAA KPASRDLISRIQQGLINIAYADVKVDGVAGQQTRNAIRAFEKHYRLPETGEPSEVVLKKLKSIGAL
Sequences:
>Translated_306_residues MVTMAPRKRKSPKKTTAQIGAGFVSLVVSAIGREILRHPKLVGGCGAFAVVFGFVAANALWYQPGVHPTPFLRTRDAENP NGIAGYRPTEPLGTHGNVTTFRIERPAENETAQPPAAAETAALPAADSQKPQQIVADIQAELKKRGLYEGDADGRMGPKT AAAIMFFEETLGMEQTGEPTTRVLAALKIDGATVAAIPKDRPSDTSGGVEIDPVAAAIRKAEAPRPKAEPASLNTSANAA KPASRDLISRIQQGLINIAYADVKVDGVAGQQTRNAIRAFEKHYRLPETGEPSEVVLKKLKSIGAL >Mature_306_residues MVTMAPRKRKSPKKTTAQIGAGFVSLVVSAIGREILRHPKLVGGCGAFAVVFGFVAANALWYQPGVHPTPFLRTRDAENP NGIAGYRPTEPLGTHGNVTTFRIERPAENETAQPPAAAETAALPAADSQKPQQIVADIQAELKKRGLYEGDADGRMGPKT AAAIMFFEETLGMEQTGEPTTRVLAALKIDGATVAAIPKDRPSDTSGGVEIDPVAAAIRKAEAPRPKAEPASLNTSANAA KPASRDLISRIQQGLINIAYADVKVDGVAGQQTRNAIRAFEKHYRLPETGEPSEVVLKKLKSIGAL
Specific function: Unknown
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32400; Mature: 32400
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTMAPRKRKSPKKTTAQIGAGFVSLVVSAIGREILRHPKLVGGCGAFAVVFGFVAANAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHH WYQPGVHPTPFLRTRDAENPNGIAGYRPTEPLGTHGNVTTFRIERPAENETAQPPAAAET EECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHH AALPAADSQKPQQIVADIQAELKKRGLYEGDADGRMGPKTAAAIMFFEETLGMEQTGEPT HCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH TRVLAALKIDGATVAAIPKDRPSDTSGGVEIDPVAAAIRKAEAPRPKAEPASLNTSANAA HHHHHHHEECCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCC KPASRDLISRIQQGLINIAYADVKVDGVAGQQTRNAIRAFEKHYRLPETGEPSEVVLKKL CCHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH KSIGAL HHHCCC >Mature Secondary Structure MVTMAPRKRKSPKKTTAQIGAGFVSLVVSAIGREILRHPKLVGGCGAFAVVFGFVAANAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHH WYQPGVHPTPFLRTRDAENPNGIAGYRPTEPLGTHGNVTTFRIERPAENETAQPPAAAET EECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHH AALPAADSQKPQQIVADIQAELKKRGLYEGDADGRMGPKTAAAIMFFEETLGMEQTGEPT HCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH TRVLAALKIDGATVAAIPKDRPSDTSGGVEIDPVAAAIRKAEAPRPKAEPASLNTSANAA HHHHHHHEECCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCC KPASRDLISRIQQGLINIAYADVKVDGVAGQQTRNAIRAFEKHYRLPETGEPSEVVLKKL CCHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH KSIGAL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA