Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888203
Identifier: 15888203
GI number: 15888203
Start: 860240
End: 860635
Strand: Direct
Name: 15888203
Synonym: Atu0862
Alternate gene names: NA
Gene position: 860240-860635 (Clockwise)
Preceding gene: 15888200
Following gene: 15888205
Centisome position: 30.27
GC content: 63.89
Gene sequence:
>396_bases ATGAACGAAGTCGTGGATCAGATCGCCGCAAAGGCGGGGATCGACCCTGAACTGGCTGAAAAGGCCATTGGCATGATTCT CGGTTTTCTCCAGCGCGAGGCGGAAGACGGCCCGATCGCCCGGATGATCGAAGCCATTCCCGGCGCCAGCGATCTGGTTG CCCAGTATAATGGCGAAGGCACCGGTGGCGGCGGCGGTCTGCTTGGCGGACTGATGAGCGCGCTCGGCGGCGGCGGCATC ATGGGCCTCGGCCAGCAGCTGATGAGCCAAGGCCTCGGCATGAGCGAGATTTCCACGCTCGCCAAGGAAACCATCGCCGT TGCCCGCCAGCATGCGGGTGATGAGACCGTCGATCAGGTGATCGCCTCGGTGCCGGGCCTCAGCCAGTTCGCTTGA
Upstream 100 bases:
>100_bases CGCACCATTCATGGCCGCTTGAATGCGGCACTGGATTGTTTTACGTTGACGTTAACGTCAGTTATTCGATGTTGGCGTCG TTTTTCAACAGGAGGCAAGA
Downstream 100 bases:
>100_bases GGCGAGTTTACTCCATCGCAGGGCGCGGCGGCTGTTCGTTGAACCGCCGCCGCGCCTCTTCTATTTCGGCATGGTGCGTC TCCGCCCAGATCCACACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MNEVVDQIAAKAGIDPELAEKAIGMILGFLQREAEDGPIARMIEAIPGASDLVAQYNGEGTGGGGGLLGGLMSALGGGGI MGLGQQLMSQGLGMSEISTLAKETIAVARQHAGDETVDQVIASVPGLSQFA
Sequences:
>Translated_131_residues MNEVVDQIAAKAGIDPELAEKAIGMILGFLQREAEDGPIARMIEAIPGASDLVAQYNGEGTGGGGGLLGGLMSALGGGGI MGLGQQLMSQGLGMSEISTLAKETIAVARQHAGDETVDQVIASVPGLSQFA >Mature_131_residues MNEVVDQIAAKAGIDPELAEKAIGMILGFLQREAEDGPIARMIEAIPGASDLVAQYNGEGTGGGGGLLGGLMSALGGGGI MGLGQQLMSQGLGMSEISTLAKETIAVARQHAGDETVDQVIASVPGLSQFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13137; Mature: 13137
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEVVDQIAAKAGIDPELAEKAIGMILGFLQREAEDGPIARMIEAIPGASDLVAQYNGEG CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCC TGGGGGLLGGLMSALGGGGIMGLGQQLMSQGLGMSEISTLAKETIAVARQHAGDETVDQV CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH IASVPGLSQFA HHHCCCCCCCC >Mature Secondary Structure MNEVVDQIAAKAGIDPELAEKAIGMILGFLQREAEDGPIARMIEAIPGASDLVAQYNGEG CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCC TGGGGGLLGGLMSALGGGGIMGLGQQLMSQGLGMSEISTLAKETIAVARQHAGDETVDQV CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH IASVPGLSQFA HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA