Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888195
Identifier: 15888195
GI number: 15888195
Start: 854313
End: 854807
Strand: Direct
Name: 15888195
Synonym: Atu0854
Alternate gene names: NA
Gene position: 854313-854807 (Clockwise)
Preceding gene: 159184499
Following gene: 159184500
Centisome position: 30.06
GC content: 58.18
Gene sequence:
>495_bases ATGGAAATTCCAACCGCCAAGCCGCAGAAGGAACACGAGTTCCTGAACAGGATCGTCGGAGACTGGATCATGACCGCCAG CTCCGGCCATGAGGCCTACGACCCCAATGATCCCGAACAGGTATTCATCGAAAAGGTGCGCTCCATCGGTGGCCTCTGGA TCATCGGCGAGGGCACCGGAAAAATGCCTGACGGTACCAGCATGACCGCTGTCATCACGGTTGGTTTCGACCCGGCCAAA GGCAATTTCGTCGGCACCTGGGTGGGCTCGATGATGACCAATCTCTGGGTTTACAAGGGTTGGCTGGAAGAGGACGGCAA GACCCTGACACTGGAGGCCGAAGGTCCTGCCTTCGACGGTTCCGGAGACACCGCCACCTACCACGACGTGCTGGTGCTGC ATGATGACAATCACCGCAGCTTTTCCGGCAGCGTCAAGCAGCCGGATGGCACCTTCAAGACCTTCATGACATCGGAGTTC CGGCGCAAGACGTAA
Upstream 100 bases:
>100_bases AGATGAGGTAATGGATTGGGTGCGCCGCCATGACCAGTATGAGGATGCGCCGAAAGCCGCATCCTGCTGCCATTGAACCG GGACATAGGAGGAGAAGACA
Downstream 100 bases:
>100_bases TTTGCGCCGGGAACGTCTGCATGACAAGCGCCGCCGCGTCCTGCGGCGGGCACTTAGCCACACCACACCACGCACCCAAT CTCCAGAGGAGACGACAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MEIPTAKPQKEHEFLNRIVGDWIMTASSGHEAYDPNDPEQVFIEKVRSIGGLWIIGEGTGKMPDGTSMTAVITVGFDPAK GNFVGTWVGSMMTNLWVYKGWLEEDGKTLTLEAEGPAFDGSGDTATYHDVLVLHDDNHRSFSGSVKQPDGTFKTFMTSEF RRKT
Sequences:
>Translated_164_residues MEIPTAKPQKEHEFLNRIVGDWIMTASSGHEAYDPNDPEQVFIEKVRSIGGLWIIGEGTGKMPDGTSMTAVITVGFDPAK GNFVGTWVGSMMTNLWVYKGWLEEDGKTLTLEAEGPAFDGSGDTATYHDVLVLHDDNHRSFSGSVKQPDGTFKTFMTSEF RRKT >Mature_164_residues MEIPTAKPQKEHEFLNRIVGDWIMTASSGHEAYDPNDPEQVFIEKVRSIGGLWIIGEGTGKMPDGTSMTAVITVGFDPAK GNFVGTWVGSMMTNLWVYKGWLEEDGKTLTLEAEGPAFDGSGDTATYHDVLVLHDDNHRSFSGSVKQPDGTFKTFMTSEF RRKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18134; Mature: 18134
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIPTAKPQKEHEFLNRIVGDWIMTASSGHEAYDPNDPEQVFIEKVRSIGGLWIIGEGTG CCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC KMPDGTSMTAVITVGFDPAKGNFVGTWVGSMMTNLWVYKGWLEEDGKTLTLEAEGPAFDG CCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHEEECEECCCCCEEEEEECCCCCCC SGDTATYHDVLVLHDDNHRSFSGSVKQPDGTFKTFMTSEFRRKT CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MEIPTAKPQKEHEFLNRIVGDWIMTASSGHEAYDPNDPEQVFIEKVRSIGGLWIIGEGTG CCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC KMPDGTSMTAVITVGFDPAKGNFVGTWVGSMMTNLWVYKGWLEEDGKTLTLEAEGPAFDG CCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHEEECEECCCCCEEEEEECCCCCCC SGDTATYHDVLVLHDDNHRSFSGSVKQPDGTFKTFMTSEFRRKT CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA