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The map label for this gene is cfp30B [H]

Identifier: 159184500

GI number: 159184500

Start: 854905

End: 855684

Strand: Direct

Name: cfp30B [H]

Synonym: Atu0855

Alternate gene names: 159184500

Gene position: 854905-855684 (Clockwise)

Preceding gene: 15888195

Following gene: 159184502

Centisome position: 30.09

GC content: 58.33

Gene sequence:

>780_bases
ATGTCCGATACACATGGAAAATTCATCTGGGTCGAATTGATGACGCCCGACATGGAGGCGGCTGCCCGCTTTTACGGTCA
TGTCGTCGGCTGGCAGACCAAGGATTTCGGTTCGCCGGAAATGCCCTATCTGGTGCTGGAAGCAGATGGCAAAGGCATGG
GCGGCGTCATGGAACTGACGGAAGAGCATAAGGGGCAGGGCATTCCCCCGAACTGGACGGCCTATGTCGATGTCGATGAT
GTCGATGCCACGGCAAAGCTGTTCGCTGACAAGGGCGGCGCGATCAGACGCCCGCCGCAGGATATTCCCGAAATCGGCCG
TTTTGCCGTGGTCGCCGATCCCTATGGTGCAGTGCTCTGCATCATGACGCCGCTGCCGATGGAGACCGGTGGTTTCCCCG
AGGATATGCAGGAAAAGAAGGGCCATGTCGGCTGGTACGAACTCTTCACCGACAATGTCGATGAGGCAATGGCCTTTTAC
GGCGAAGTCTTCGGCTGGACCAAGGACCATGATTTCGACATGGGCGAGATGGGTCCGTACCGCATCTTCGCCCACAAGGG
CAAAGCCGTCGGCGGCATCATGAAGCGCATGCCGCAGGTTCCCGTCTGCCATTGGGGTTATTACTTCAATGTCGATGGTA
TCGAGGACGCGATCACCCGTGTCAGCACCGGCGGCGGCAAGGTCGTCAACGGGCCCATGGAAGTTCCCGGCGAAAGCTGG
ATCGTCAACTGCGTCGATCCGCAGGGCGCCTATTTCTCGCTGGTCTCGCAGAAGAAATAA

Upstream 100 bases:

>100_bases
TAATTTGCGCCGGGAACGTCTGCATGACAAGCGCCGCCGCGTCCTGCGGCGGGCACTTAGCCACACCACACCACGCACCC
AATCTCCAGAGGAGACGACA

Downstream 100 bases:

>100_bases
TCTTGCTTCTTCTCGAAAACGATCTGCCGGGGGTCCGCTCCGGCAGATTACCGCTCTCTCGATAGCCTGACATGATCGAT
GAAGGCGCGCAGCTTCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSDTHGKFIWVELMTPDMEAAARFYGHVVGWQTKDFGSPEMPYLVLEADGKGMGGVMELTEEHKGQGIPPNWTAYVDVDD
VDATAKLFADKGGAIRRPPQDIPEIGRFAVVADPYGAVLCIMTPLPMETGGFPEDMQEKKGHVGWYELFTDNVDEAMAFY
GEVFGWTKDHDFDMGEMGPYRIFAHKGKAVGGIMKRMPQVPVCHWGYYFNVDGIEDAITRVSTGGGKVVNGPMEVPGESW
IVNCVDPQGAYFSLVSQKK

Sequences:

>Translated_259_residues
MSDTHGKFIWVELMTPDMEAAARFYGHVVGWQTKDFGSPEMPYLVLEADGKGMGGVMELTEEHKGQGIPPNWTAYVDVDD
VDATAKLFADKGGAIRRPPQDIPEIGRFAVVADPYGAVLCIMTPLPMETGGFPEDMQEKKGHVGWYELFTDNVDEAMAFY
GEVFGWTKDHDFDMGEMGPYRIFAHKGKAVGGIMKRMPQVPVCHWGYYFNVDGIEDAITRVSTGGGKVVNGPMEVPGESW
IVNCVDPQGAYFSLVSQKK
>Mature_258_residues
SDTHGKFIWVELMTPDMEAAARFYGHVVGWQTKDFGSPEMPYLVLEADGKGMGGVMELTEEHKGQGIPPNWTAYVDVDDV
DATAKLFADKGGAIRRPPQDIPEIGRFAVVADPYGAVLCIMTPLPMETGGFPEDMQEKKGHVGWYELFTDNVDEAMAFYG
EVFGWTKDHDFDMGEMGPYRIFAHKGKAVGGIMKRMPQVPVCHWGYYFNVDGIEDAITRVSTGGGKVVNGPMEVPGESWI
VNCVDPQGAYFSLVSQKK

Specific function: Unknown

COG id: COG3324

COG function: function code R; Predicted enzyme related to lactoylglutathione lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 28601; Mature: 28470

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTHGKFIWVELMTPDMEAAARFYGHVVGWQTKDFGSPEMPYLVLEADGKGMGGVMELT
CCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH
EEHKGQGIPPNWTAYVDVDDVDATAKLFADKGGAIRRPPQDIPEIGRFAVVADPYGAVLC
HHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHCCEEEEECCCCEEEE
IMTPLPMETGGFPEDMQEKKGHVGWYELFTDNVDEAMAFYGEVFGWTKDHDFDMGEMGPY
EECCCCCCCCCCCHHHHHHCCCCCEEEHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCE
RIFAHKGKAVGGIMKRMPQVPVCHWGYYFNVDGIEDAITRVSTGGGKVVNGPMEVPGESW
EEEEECCCHHHHHHHHCCCCCEEECEEEEECCCHHHHHHHHCCCCCEEEECCCCCCCCCE
IVNCVDPQGAYFSLVSQKK
EEEEECCCCCEEEEEECCC
>Mature Secondary Structure 
SDTHGKFIWVELMTPDMEAAARFYGHVVGWQTKDFGSPEMPYLVLEADGKGMGGVMELT
CCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH
EEHKGQGIPPNWTAYVDVDDVDATAKLFADKGGAIRRPPQDIPEIGRFAVVADPYGAVLC
HHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHCCEEEEECCCCEEEE
IMTPLPMETGGFPEDMQEKKGHVGWYELFTDNVDEAMAFYGEVFGWTKDHDFDMGEMGPY
EECCCCCCCCCCCHHHHHHCCCCCEEEHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCE
RIFAHKGKAVGGIMKRMPQVPVCHWGYYFNVDGIEDAITRVSTGGGKVVNGPMEVPGESW
EEEEECCCHHHHHHHHCCCCCEEECEEEEECCCHHHHHHHHCCCCCEEEECCCCCCCCCE
IVNCVDPQGAYFSLVSQKK
EEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]