Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888084
Identifier: 15888084
GI number: 15888084
Start: 740691
End: 741062
Strand: Direct
Name: 15888084
Synonym: Atu0742
Alternate gene names: NA
Gene position: 740691-741062 (Clockwise)
Preceding gene: 15888083
Following gene: 159184447
Centisome position: 26.07
GC content: 55.11
Gene sequence:
>372_bases TTGAACAGTGAAATCGAACTCCCGGTGCAAAAGCAGCTGGAGGCCTATAATGCCCGCGACATCGATGCATTCATGGCCTG GTGGGCGGATGATTGTCAGTATTATGCGTTCCCGGCGACGCTTCTGGCAGGAAACGCGGCCGAGATACGAGTGCGCCACA TCGAGCGCTTCAAGGAGCCGGATTTATACGGGGAACTGCTGACGCGCGTTATTGTTGGAAATGTCGTCATCGACCATGAG ACCGTCACGCGGAACTTTCCGGAAGGAAAGGGAGAGGTCGACGTTGCCTGCATCTATGAAGTCGAAAACGGCAGGATCGC CAAGGCTTGGTTCAAGATCGGCGAGCCGCGGATAGTGTCGCAAAAATCCTAG
Upstream 100 bases:
>100_bases CAATGATCTGGAGAAAACAGCCGACCTGCTGGCAAATGCAGGGCATTCACTCCTTTAAAAATCTATTTCGCCACGACGGC TTTTCTAAAAGAGGTGCGTT
Downstream 100 bases:
>100_bases CATGCGCAGAGGACCCGCGTCTCGTGCGCGGGGCTTCTTCACGGTCCATTTCGTTATGTGGCGTAGTCGGCCCGCATGGG ATGCCAGACGGAAATATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNSEIELPVQKQLEAYNARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIERFKEPDLYGELLTRVIVGNVVIDHE TVTRNFPEGKGEVDVACIYEVENGRIAKAWFKIGEPRIVSQKS
Sequences:
>Translated_123_residues MNSEIELPVQKQLEAYNARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIERFKEPDLYGELLTRVIVGNVVIDHE TVTRNFPEGKGEVDVACIYEVENGRIAKAWFKIGEPRIVSQKS >Mature_123_residues MNSEIELPVQKQLEAYNARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIERFKEPDLYGELLTRVIVGNVVIDHE TVTRNFPEGKGEVDVACIYEVENGRIAKAWFKIGEPRIVSQKS
Specific function: Unknown
COG id: COG4538
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14060; Mature: 14060
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEIELPVQKQLEAYNARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIERFKEP CCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEECHHHHCCCCHHHHHHHHHHCCCC DLYGELLTRVIVGNVVIDHETVTRNFPEGKGEVDVACIYEVENGRIAKAWFKIGEPRIVS CHHHHHHHHHHHCCEEECCHHHCCCCCCCCCCEEEEEEEEECCCEEEEHHHHCCCCEEEC QKS CCC >Mature Secondary Structure MNSEIELPVQKQLEAYNARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIERFKEP CCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEECHHHHCCCCHHHHHHHHHHCCCC DLYGELLTRVIVGNVVIDHETVTRNFPEGKGEVDVACIYEVENGRIAKAWFKIGEPRIVS CHHHHHHHHHHHCCEEECCHHHCCCCCCCCCCEEEEEEEEECCCEEEEHHHHCCCCEEEC QKS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA