Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888016
Identifier: 15888016
GI number: 15888016
Start: 669486
End: 670250
Strand: Reverse
Name: 15888016
Synonym: Atu0673
Alternate gene names: NA
Gene position: 670250-669486 (Counterclockwise)
Preceding gene: 15888017
Following gene: 159184416
Centisome position: 23.59
GC content: 61.18
Gene sequence:
>765_bases ATGATCCTCGAAGCCCTGCAATATGCCGCCACCCGTGCGGTCACGCCGAAAGAATTCCGGCCGCATGTCCGCTATTCCGT CAACCTCTGGGCGCGCGCCAATCGGTGCGCGAAAGCCTGGGCGGAGCATGAGAACAACAGCCGGCAATTCGTGCTGCAAT CGGCGAAAAAGCTGAAGCAGCGACGGACGGCTGTCGTGCTGGGGTCCGGCCTGTTGCGGGATGTGCCCCATGATGCGCTG GTGGCGATGTTCGATACCGTCGTTATGGTCGATCTGGTGCACCTTGCCAGCGTGCAGGCGAAGCTGCGGCTCAATGCCAA AAAGAACGTCCGCATCGCCAATCGCGACCTTTCCGGCTTCGATGACCTTTTGGCCGGCCGGCCCGCGGAACCGCTCGATT TCCTGCGGCGCGTGCCCTATCTCGATTTCGTTGTCTCGGCCAACCTCCTGTCGCAGATCGGCACCGGGGCACAGCATCGG CTGGAACGGGAGAAAATTGCGAATGTGCCTGGTGATCTTTTGCCAAAACTCATTCAGACACATCTCGATGCGCTGGCCGG CCTGCCCTGCAAGGTCTGTCTGGTGACGGACACCGCCTTCGACGTCATTGGCAAGGATGGTAGCGTGCAGCAGCATGAAG ACCTGCTGCATGGCATCGAGATTGCCTCGCCTGCCGCCGCATGGGACTGGCCGCTCGCGCCCTTCGGGGAGGAAAGCCGG GATTATCGCATCGTGCATCACGTCATTGCGCGGGAAATGACGTGA
Upstream 100 bases:
>100_bases GGTGGGCGATTACCGCATCATCTGCGATATACAGGACCAAAAGCTGGTCGTTCTGGTGGTCGAAATCGGCCATCGCCGTG AAATTTACCGTTAGGCATTC
Downstream 100 bases:
>100_bases TCGTCACGCGCCTTGCGTCTTCGGCCTACAACCCCGCAAGACCCGCCTTGTAATCCTCCGACGCCGCCCGGCTGAGGCGC TCCAGTTCCATCGCCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MILEALQYAATRAVTPKEFRPHVRYSVNLWARANRCAKAWAEHENNSRQFVLQSAKKLKQRRTAVVLGSGLLRDVPHDAL VAMFDTVVMVDLVHLASVQAKLRLNAKKNVRIANRDLSGFDDLLAGRPAEPLDFLRRVPYLDFVVSANLLSQIGTGAQHR LEREKIANVPGDLLPKLIQTHLDALAGLPCKVCLVTDTAFDVIGKDGSVQQHEDLLHGIEIASPAAAWDWPLAPFGEESR DYRIVHHVIAREMT
Sequences:
>Translated_254_residues MILEALQYAATRAVTPKEFRPHVRYSVNLWARANRCAKAWAEHENNSRQFVLQSAKKLKQRRTAVVLGSGLLRDVPHDAL VAMFDTVVMVDLVHLASVQAKLRLNAKKNVRIANRDLSGFDDLLAGRPAEPLDFLRRVPYLDFVVSANLLSQIGTGAQHR LEREKIANVPGDLLPKLIQTHLDALAGLPCKVCLVTDTAFDVIGKDGSVQQHEDLLHGIEIASPAAAWDWPLAPFGEESR DYRIVHHVIAREMT >Mature_254_residues MILEALQYAATRAVTPKEFRPHVRYSVNLWARANRCAKAWAEHENNSRQFVLQSAKKLKQRRTAVVLGSGLLRDVPHDAL VAMFDTVVMVDLVHLASVQAKLRLNAKKNVRIANRDLSGFDDLLAGRPAEPLDFLRRVPYLDFVVSANLLSQIGTGAQHR LEREKIANVPGDLLPKLIQTHLDALAGLPCKVCLVTDTAFDVIGKDGSVQQHEDLLHGIEIASPAAAWDWPLAPFGEESR DYRIVHHVIAREMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28328; Mature: 28328
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILEALQYAATRAVTPKEFRPHVRYSVNLWARANRCAKAWAEHENNSRQFVLQSAKKLKQ CHHHHHHHHHHHCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RRTAVVLGSGLLRDVPHDALVAMFDTVVMVDLVHLASVQAKLRLNAKKNVRIANRDLSGF HHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCH DDLLAGRPAEPLDFLRRVPYLDFVVSANLLSQIGTGAQHRLEREKIANVPGDLLPKLIQT HHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH HLDALAGLPCKVCLVTDTAFDVIGKDGSVQQHEDLLHGIEIASPAAAWDWPLAPFGEESR HHHHHHCCCEEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC DYRIVHHVIAREMT HHHHHHHHHHHCCC >Mature Secondary Structure MILEALQYAATRAVTPKEFRPHVRYSVNLWARANRCAKAWAEHENNSRQFVLQSAKKLKQ CHHHHHHHHHHHCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RRTAVVLGSGLLRDVPHDALVAMFDTVVMVDLVHLASVQAKLRLNAKKNVRIANRDLSGF HHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCH DDLLAGRPAEPLDFLRRVPYLDFVVSANLLSQIGTGAQHRLEREKIANVPGDLLPKLIQT HHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH HLDALAGLPCKVCLVTDTAFDVIGKDGSVQQHEDLLHGIEIASPAAAWDWPLAPFGEESR HHHHHHCCCEEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC DYRIVHHVIAREMT HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA