Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888017
Identifier: 15888017
GI number: 15888017
Start: 670257
End: 670526
Strand: Reverse
Name: 15888017
Synonym: Atu0674
Alternate gene names: NA
Gene position: 670526-670257 (Counterclockwise)
Preceding gene: 15888018
Following gene: 15888016
Centisome position: 23.6
GC content: 53.7
Gene sequence:
>270_bases GTGATCTGGACAATTGAATATCACACGCTTGTGCAGAAAGAGATGCGCAAAATAAATCCGGAAGTGCGCCGGCGCATCCG CAGTTTTCTCCATGAAAGGCTGGCCGCACTGGACGACCCGCGCCAGATCGGCGCTACACTGCAAGGTTCCGAACTCGGAA ATTTCTGGCGTTACCGGGTGGGCGATTACCGCATCATCTGCGATATACAGGACCAAAAGCTGGTCGTTCTGGTGGTCGAA ATCGGCCATCGCCGTGAAATTTACCGTTAG
Upstream 100 bases:
>100_bases AAGCATATCGAGGATATGGAAGACCTCTATCTTGCCGAAGAGGCGACGCGGCGCATTCAGCGCGGAGAATCGAAGATTAT AAGCGCCGAGGAGTTCTGGC
Downstream 100 bases:
>100_bases GCATTCATGATCCTCGAAGCCCTGCAATATGCCGCCACCCGTGCGGTCACGCCGAAAGAATTCCGGCCGCATGTCCGCTA TTCCGTCAACCTCTGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Plasmid Stabilization System Protein; Addiction Module Antitoxin; Xin-Like Protein; Plasmid Addiction System Poison Protein; Plasmid Stabilisation System Protein; Addiction Module xin RelE/StbE; Xin-Antitoxin System Toxin Component RelE Family; Plasmid Stabilization System; Plasmid Addiction System xin Protein; RelE-Domain-Containing Protein; RelE Protein; Plasmid Stabilization System Family Protein; RelE/StbE Family Addiction Module xin
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MIWTIEYHTLVQKEMRKINPEVRRRIRSFLHERLAALDDPRQIGATLQGSELGNFWRYRVGDYRIICDIQDQKLVVLVVE IGHRREIYR
Sequences:
>Translated_89_residues MIWTIEYHTLVQKEMRKINPEVRRRIRSFLHERLAALDDPRQIGATLQGSELGNFWRYRVGDYRIICDIQDQKLVVLVVE IGHRREIYR >Mature_89_residues MIWTIEYHTLVQKEMRKINPEVRRRIRSFLHERLAALDDPRQIGATLQGSELGNFWRYRVGDYRIICDIQDQKLVVLVVE IGHRREIYR
Specific function: Unknown
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10779; Mature: 10779
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWTIEYHTLVQKEMRKINPEVRRRIRSFLHERLAALDDPRQIGATLQGSELGNFWRYRV CEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEC GDYRIICDIQDQKLVVLVVEIGHRREIYR CCEEEEEEECCCEEEEEEEECCCCCCCCC >Mature Secondary Structure MIWTIEYHTLVQKEMRKINPEVRRRIRSFLHERLAALDDPRQIGATLQGSELGNFWRYRV CEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEC GDYRIICDIQDQKLVVLVVEIGHRREIYR CCEEEEEEECCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA