Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888001
Identifier: 15888001
GI number: 15888001
Start: 653758
End: 654237
Strand: Reverse
Name: 15888001
Synonym: Atu0659
Alternate gene names: NA
Gene position: 654237-653758 (Counterclockwise)
Preceding gene: 15888002
Following gene: 159184409
Centisome position: 23.02
GC content: 56.04
Gene sequence:
>480_bases TTGAAGATTTTGAATCGATTGGCGACAGATGTTGGCTTGATGTTGCGCAGACCGCCGCGACAGCAATATGCGGCGCTGTG CTATCGATTGTCCAAGAGCAATCCGGAGCCGGAAGTGCTGCTGCTGACCAGCCGTGACACCGGACGGTGGGTCATTCCCA AGGGCTGGCCGATGGCCAACAAAAAGGCCCATGCGGTGGCCGAACAGGAAGCCTATGAAGAAGCCGGTGTCAAAGGCACG GTTGAAAAGGCGCCTTTCGGTTATTACGAATATGAGAAGAAGCTGAACAGCGGCATCAACGTGCCATGCAAGGTTCAGGT GCATCTGCTCGAAGTTTCGGAAATGCGCGACAGCTTTCCGGAAAAGGACGCGCGACGGCTGGAATGGGTCAGTCCCAGGG AAGCCGGAAAACGCGTCAACGAGCCGGAACTGAAAGCGCTGATGCTCGCTTTCGACAAGCGGATGGCGCATTCGCAATAG
Upstream 100 bases:
>100_bases ATGAAGACAGTAGTGGGTTATGGGTAAAGGGGGATTGGCGTAACTTGCAGCGTCTCTATATTAGCAATTATCACTACCCG ACGAAGAGGATTTATTCGGA
Downstream 100 bases:
>100_bases CGCCGTCGCCCGAAGAGTGGCAATGTGGAGTTTGGTTCTCCGACATCTGCTCTTCCCGTCTTTTCTTTTGGAAAGATGTG CGCGATGTAACAGTCTTTCT
Product: MutT family NTP pyrophosphatase
Products: NA
Alternate protein names: Nudix Hydrolase; Nudix Domain Protein; Hydrolase Nudix Family; MutT/NUDIX Family NTP Pyrophosphohydrolase; NTP Pyrophosphohydrolase Protein MuT/Nudix Family; Hydrolase NUDIX Family; NUDIX Family Hydrolase; MutT Family NTP Pyrophosphatase; NTP Pyrophosphohydrolase MutT Family; NUDIX Domain-Containing Protein; NTP Pyrophosphohydrolase Protein; Hydrolase NUDIX Family Protein; Phosphohistidine Phosphatase SixA; Bis(5-Nucleosidyl)-Tetraphosphatase; MutT/Nudix Family Phosphohydrolase; NUDIX Superfamily Hydrolase; Orf_Bo; NUDIX Family Protein
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKILNRLATDVGLMLRRPPRQQYAALCYRLSKSNPEPEVLLLTSRDTGRWVIPKGWPMANKKAHAVAEQEAYEEAGVKGT VEKAPFGYYEYEKKLNSGINVPCKVQVHLLEVSEMRDSFPEKDARRLEWVSPREAGKRVNEPELKALMLAFDKRMAHSQ
Sequences:
>Translated_159_residues MKILNRLATDVGLMLRRPPRQQYAALCYRLSKSNPEPEVLLLTSRDTGRWVIPKGWPMANKKAHAVAEQEAYEEAGVKGT VEKAPFGYYEYEKKLNSGINVPCKVQVHLLEVSEMRDSFPEKDARRLEWVSPREAGKRVNEPELKALMLAFDKRMAHSQ >Mature_159_residues MKILNRLATDVGLMLRRPPRQQYAALCYRLSKSNPEPEVLLLTSRDTGRWVIPKGWPMANKKAHAVAEQEAYEEAGVKGT VEKAPFGYYEYEKKLNSGINVPCKVQVHLLEVSEMRDSFPEKDARRLEWVSPREAGKRVNEPELKALMLAFDKRMAHSQ
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18225; Mature: 18225
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILNRLATDVGLMLRRPPRQQYAALCYRLSKSNPEPEVLLLTSRDTGRWVIPKGWPMAN CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCCCCCCC KKAHAVAEQEAYEEAGVKGTVEKAPFGYYEYEKKLNSGINVPCKVQVHLLEVSEMRDSFP CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEHHHHHHCCC EKDARRLEWVSPREAGKRVNEPELKALMLAFDKRMAHSQ CCHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKILNRLATDVGLMLRRPPRQQYAALCYRLSKSNPEPEVLLLTSRDTGRWVIPKGWPMAN CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCCCCCCC KKAHAVAEQEAYEEAGVKGTVEKAPFGYYEYEKKLNSGINVPCKVQVHLLEVSEMRDSFP CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEHHHHHHCCC EKDARRLEWVSPREAGKRVNEPELKALMLAFDKRMAHSQ CCHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA