Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is fliQ
Identifier: 15887925
GI number: 15887925
Start: 564158
End: 564424
Strand: Direct
Name: fliQ
Synonym: Atu0580
Alternate gene names: NA
Gene position: 564158-564424 (Clockwise)
Preceding gene: 15887924
Following gene: 159184372
Centisome position: 19.85
GC content: 58.43
Gene sequence:
>267_bases ATGAACGAGGCCGATGCGCTTGATATCATGCAGGCGGCAGTCTGGACTGTTCTCGTCGCGGCCGGTCCGGCGGTTCTGGC CGCCATGATCGTCGGTGTCGCCATCGCCTTCATTCAGGCCCTGACTCAGGTTCAGGAAATGACGCTGACCTTCGTTCCAA AGATTGTGACGATCATGATCGTCCTCGGTGTCGCCGCCCCCTTTGTGGGCGCGCAGATCGTGCTTTTTTCCAACCTCGTC TTTTCCCGTATCCAGTCGGGCTTCTGA
Upstream 100 bases:
>100_bases CACGACTAAATCTGACGAAACGACGGCTGATTCGAACAACTCGGCCGGTTCCTGATAGTGAGGCGGCATGATGCCGCCTC TATAAAACAAGGATGCGACG
Downstream 100 bases:
>100_bases CCCCCGTTTTCTTCGGATGCCATCCTCGCGCAAGCTTCAGCGGCTAGGGATAGGCTGAAGGCATCGGCCCGAATTGCGTT CGCTTTTCGAAAACCGATGC
Product: flagellar biosynthesis protein FliQ
Products: NA
Alternate protein names: Flagellar Biosynthetic Protein FliQ; Flagellar Biosynthesis Transmembrane Protein
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MNEADALDIMQAAVWTVLVAAGPAVLAAMIVGVAIAFIQALTQVQEMTLTFVPKIVTIMIVLGVAAPFVGAQIVLFSNLV FSRIQSGF
Sequences:
>Translated_88_residues MNEADALDIMQAAVWTVLVAAGPAVLAAMIVGVAIAFIQALTQVQEMTLTFVPKIVTIMIVLGVAAPFVGAQIVLFSNLV FSRIQSGF >Mature_88_residues MNEADALDIMQAAVWTVLVAAGPAVLAAMIVGVAIAFIQALTQVQEMTLTFVPKIVTIMIVLGVAAPFVGAQIVLFSNLV FSRIQSGF
Specific function: Unknown
COG id: COG1987
COG function: function code NU; Flagellar biosynthesis pathway, component FliQ
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9234; Mature: 9234
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEADALDIMQAAVWTVLVAAGPAVLAAMIVGVAIAFIQALTQVQEMTLTFVPKIVTIMI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGVAAPFVGAQIVLFSNLVFSRIQSGF HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNEADALDIMQAAVWTVLVAAGPAVLAAMIVGVAIAFIQALTQVQEMTLTFVPKIVTIMI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGVAAPFVGAQIVLFSNLVFSRIQSGF HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA