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The map label for this gene is flaF

Identifier: 15887922

GI number: 15887922

Start: 562858

End: 563202

Strand: Direct

Name: flaF

Synonym: Atu0577

Alternate gene names: NA

Gene position: 562858-563202 (Clockwise)

Preceding gene: 15887921

Following gene: 15887923

Centisome position: 19.81

GC content: 51.59

Gene sequence:

>345_bases
ATGTACCAGTTTTCCTACGCCGAAATCATGGAGGATGGTGTCGCCAACGCGAAAGATCGCGAGCGGCAGGCGTTGACAAA
ATCGATCGACCTTCTGGTGGAGGCAAGGGACTCCTCTTCGCAGCGCCACTCGATCGAAGCACTTTTTTACACTCGACGGG
TCTGGATCCGCTTCATTGAGGATCTCAAGCAACCCGACAACCAGCTGGCCATGGAACTGAGAGCCAATCTGATTTCCATC
GCGATCTGGATTTTGAAAGAGTGCGAACTGATCCGGAAACGTCAGTCGACGAATTTCCAGGGCATAATTGACGTGACAAC
CATCATCAGGGATGGACTGAAATGA

Upstream 100 bases:

>100_bases
CAGATTGAGATAGCATACAGCCTGACGTCGCGTCTGCAAAAAATGAGTCTGGTAAACTACCTCTGATGAACAGGGGTGGC
GGCAGATAAAGGATACATGA

Downstream 100 bases:

>100_bases
AAAGTACACTTCGAATCTCGCTGAAATCGGGCGAAAAGATTTTCATCAACGGCGCGGTTCTGCGTGTGGATCGCAAGGTG
GCGCTGGAATTCCTGAACGA

Product: flagellar biosynthesis regulatory protein FlaF

Products: NA

Alternate protein names: Flagellar FlaF Family Protein; Flagellar Protein FlaF; Flagellar FlaF; Flagellin Synthesis Regulator Protein

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MYQFSYAEIMEDGVANAKDRERQALTKSIDLLVEARDSSSQRHSIEALFYTRRVWIRFIEDLKQPDNQLAMELRANLISI
AIWILKECELIRKRQSTNFQGIIDVTTIIRDGLK

Sequences:

>Translated_114_residues
MYQFSYAEIMEDGVANAKDRERQALTKSIDLLVEARDSSSQRHSIEALFYTRRVWIRFIEDLKQPDNQLAMELRANLISI
AIWILKECELIRKRQSTNFQGIIDVTTIIRDGLK
>Mature_114_residues
MYQFSYAEIMEDGVANAKDRERQALTKSIDLLVEARDSSSQRHSIEALFYTRRVWIRFIEDLKQPDNQLAMELRANLISI
AIWILKECELIRKRQSTNFQGIIDVTTIIRDGLK

Specific function: Unknown

COG id: COG5442

COG function: function code N; Flagellar biosynthesis regulator FlaF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13362; Mature: 13362

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQFSYAEIMEDGVANAKDRERQALTKSIDLLVEARDSSSQRHSIEALFYTRRVWIRFIE
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
DLKQPDNQLAMELRANLISIAIWILKECELIRKRQSTNFQGIIDVTTIIRDGLK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MYQFSYAEIMEDGVANAKDRERQALTKSIDLLVEARDSSSQRHSIEALFYTRRVWIRFIE
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
DLKQPDNQLAMELRANLISIAIWILKECELIRKRQSTNFQGIIDVTTIIRDGLK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA