Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is flgL
Identifier: 15887921
GI number: 15887921
Start: 561720
End: 562823
Strand: Direct
Name: flgL
Synonym: Atu0576
Alternate gene names: NA
Gene position: 561720-562823 (Clockwise)
Preceding gene: 15887920
Following gene: 15887922
Centisome position: 19.77
GC content: 56.16
Gene sequence:
>1104_bases ATGAAAACGTCCTTCATTTCATCGCTGGCAATGCAGAACAGCATGCGCAGCACCATCCTGAAGGCTCAGCTTGAGATGAC CAATCTCAATACCGAGCTGACGACGGGCAAGCATGCCGATCTCGGTCTGACGCTGGGCGCCAATACCGCCCGCAGCCTCG ATCTCAATCGCGACATCGACCGCATCTCCTCGCTGGTCAGCGTCAATTCGATTGCGACGCAACGCCTCAAGTCCTCGCAG ACGGCGCTGGACGGCATGGCGAAAGCCGCGCAGGAAATCCAGAAGGTGCTGGTCCCCAACACCAGCAGTGAAGCACCGAC GCTGACGACGGTCTCCCAGACCATCTCGAATGCGTTCAACAACTTCACCAGCTTCGCCAATACGGCGGTCAATGGCGAGT TTCTGTTTTCCGGCATCAATACGGATGTGAAGCCCGTCGATGACTATTTCGCGGATGGTTCTCCGCTGAAAGCGGCCTAT GAGACGGAACTGAACGCGTTCATGGCGGCGCAGACGCCGCCGGTCGGCGATTTCGCAAGCCTGTCGAAAACGCAGGTCGA AGGCTTCATGACGCATATCGAAGGCGTCTTTAAAGGCACGACCACCGTCACGAACCCGCCGCACACCAGCCTGACGGCCG GCCAGAACTACGATTTCTGGACGACCTTCGGTTCGAAAGCGAGCAACACCAACATGACGAGCCGTATCAGCCAGAACGAG ATCGTGGAAACGTCCAGCAACAGCAACTCGCAGGGTATGCGCTATTTCGCACTGACCGCGATGACGTCGATGACGTTCCT TGATCCGAAGGTGGACAGCGGCATCCGCGAAATGGTCGCCATGAAGTCGGTGACGAATATCGGCACCGCCATCAATGGTC TGAACCAGCAGCAAAGCCAGCTCGGTCTTTCCGAAAGCCGTGTTTCAAAAGCCAATGATTCGCTGGAGGCCCAGAAGAAG ATCATCGAAACACATCTGCTGGATATTGAGGGGATCGATACCTACGAGGCGAAAACCCGTCTCGACCTGCTGCAGCAGCA GATTGAGATAGCATACAGCCTGACGTCGCGTCTGCAAAAAATGAGTCTGGTAAACTACCTCTGA
Upstream 100 bases:
>100_bases GCTGCTCATGGATATCGAACAATCCTACAAGGCCGCCACGAAACTTGTGACCACCGTCGACGAGATGCTCAAGTCGCTGA TGGACATGGTGAGGTAAACG
Downstream 100 bases:
>100_bases TGAACAGGGGTGGCGGCAGATAAAGGATACATGAATGTACCAGTTTTCCTACGCCGAAATCATGGAGGATGGTGTCGCCA ACGCGAAAGATCGCGAGCGG
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: Flagellar Hook-Associated 3 Family Protein; Flagellar Hook-Assosiated Protein
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MKTSFISSLAMQNSMRSTILKAQLEMTNLNTELTTGKHADLGLTLGANTARSLDLNRDIDRISSLVSVNSIATQRLKSSQ TALDGMAKAAQEIQKVLVPNTSSEAPTLTTVSQTISNAFNNFTSFANTAVNGEFLFSGINTDVKPVDDYFADGSPLKAAY ETELNAFMAAQTPPVGDFASLSKTQVEGFMTHIEGVFKGTTTVTNPPHTSLTAGQNYDFWTTFGSKASNTNMTSRISQNE IVETSSNSNSQGMRYFALTAMTSMTFLDPKVDSGIREMVAMKSVTNIGTAINGLNQQQSQLGLSESRVSKANDSLEAQKK IIETHLLDIEGIDTYEAKTRLDLLQQQIEIAYSLTSRLQKMSLVNYL
Sequences:
>Translated_367_residues MKTSFISSLAMQNSMRSTILKAQLEMTNLNTELTTGKHADLGLTLGANTARSLDLNRDIDRISSLVSVNSIATQRLKSSQ TALDGMAKAAQEIQKVLVPNTSSEAPTLTTVSQTISNAFNNFTSFANTAVNGEFLFSGINTDVKPVDDYFADGSPLKAAY ETELNAFMAAQTPPVGDFASLSKTQVEGFMTHIEGVFKGTTTVTNPPHTSLTAGQNYDFWTTFGSKASNTNMTSRISQNE IVETSSNSNSQGMRYFALTAMTSMTFLDPKVDSGIREMVAMKSVTNIGTAINGLNQQQSQLGLSESRVSKANDSLEAQKK IIETHLLDIEGIDTYEAKTRLDLLQQQIEIAYSLTSRLQKMSLVNYL >Mature_367_residues MKTSFISSLAMQNSMRSTILKAQLEMTNLNTELTTGKHADLGLTLGANTARSLDLNRDIDRISSLVSVNSIATQRLKSSQ TALDGMAKAAQEIQKVLVPNTSSEAPTLTTVSQTISNAFNNFTSFANTAVNGEFLFSGINTDVKPVDDYFADGSPLKAAY ETELNAFMAAQTPPVGDFASLSKTQVEGFMTHIEGVFKGTTTVTNPPHTSLTAGQNYDFWTTFGSKASNTNMTSRISQNE IVETSSNSNSQGMRYFALTAMTSMTFLDPKVDSGIREMVAMKSVTNIGTAINGLNQQQSQLGLSESRVSKANDSLEAQKK IIETHLLDIEGIDTYEAKTRLDLLQQQIEIAYSLTSRLQKMSLVNYL
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39889; Mature: 39889
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSFISSLAMQNSMRSTILKAQLEMTNLNTELTTGKHADLGLTLGANTARSLDLNRDID CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEECCCCCCCCCCCCCHH RISSLVSVNSIATQRLKSSQTALDGMAKAAQEIQKVLVPNTSSEAPTLTTVSQTISNAFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH NFTSFANTAVNGEFLFSGINTDVKPVDDYFADGSPLKAAYETELNAFMAAQTPPVGDFAS HHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH LSKTQVEGFMTHIEGVFKGTTTVTNPPHTSLTAGQNYDFWTTFGSKASNTNMTSRISQNE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCHHH IVETSSNSNSQGMRYFALTAMTSMTFLDPKVDSGIREMVAMKSVTNIGTAINGLNQQQSQ HEECCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LGLSESRVSKANDSLEAQKKIIETHLLDIEGIDTYEAKTRLDLLQQQIEIAYSLTSRLQK CCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MSLVNYL HHHHHCC >Mature Secondary Structure MKTSFISSLAMQNSMRSTILKAQLEMTNLNTELTTGKHADLGLTLGANTARSLDLNRDID CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEECCCCCCCCCCCCCHH RISSLVSVNSIATQRLKSSQTALDGMAKAAQEIQKVLVPNTSSEAPTLTTVSQTISNAFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH NFTSFANTAVNGEFLFSGINTDVKPVDDYFADGSPLKAAYETELNAFMAAQTPPVGDFAS HHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH LSKTQVEGFMTHIEGVFKGTTTVTNPPHTSLTAGQNYDFWTTFGSKASNTNMTSRISQNE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCHHH IVETSSNSNSQGMRYFALTAMTSMTFLDPKVDSGIREMVAMKSVTNIGTAINGLNQQQSQ HEECCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LGLSESRVSKANDSLEAQKKIIETHLLDIEGIDTYEAKTRLDLLQQQIEIAYSLTSRLQK CCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MSLVNYL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA