Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is flgK [C]
Identifier: 15887920
GI number: 15887920
Start: 560238
End: 561716
Strand: Direct
Name: flgK [C]
Synonym: Atu0575
Alternate gene names: 15887920
Gene position: 560238-561716 (Clockwise)
Preceding gene: 15887919
Following gene: 15887921
Centisome position: 19.72
GC content: 57.07
Gene sequence:
>1479_bases ATGTCGCTCACGTCAGCAATGAATACTGCGCAATCGATTTTCAATAACACAGGTAAGCAGACCGACGTTACTTCGAAAAA CATTGCCAATGTCGGTAATGCGAACTACGTCAAGCGAACCGCCATTCTCGGCACGACCATGGCCGGAGCGAGTATCGTCT CCAATGGCCGTGCCCAGAATGAAAGTCTTCTTCGACAGACTATCTCCAGCTCTTCTCTTGCTTCCGGCCAGAGCTCCGTT CTGAGCGGTCTCGAGGAAATAAAGAGCATTTTTGGCGGCAACAATTACGAGAGTTCGCCAGCCAACTATATGAAAGAACT GCTCAAGAGCCTGGACGGCTACGCGGCAAAGCCGAGTGATGCGGCGCTGGCAGCGACGGCCGTTACTTCGGCTTCGGATG TCGCCAGTTCGCTCAACAACGCTTCGTCCGAACTGCAGGGGATGCGCCTGCGCGCCGACAAGGAGATGTCCCTCCAGGTC GACAAGCTGAACGGACTGCTTGCGAAGTTCGAAGAAGCCAACAACGAGGTCAAGGCGCAGACAGCGATCGGCGGTGATGC GAGCGATGCGCTCGATCAGCGCGAGACGCTTCTGAAGGACATTTCCTCCATCGTCGGCATCAATGTCGTCAATCGCCCCA ACAACGATGTCGCGCTTTACACGACTGACGGCGCGACGCTGTTCGAGATTGTGCCGCGCAGCGTGACCTTCAAGACGCAG CCGGGTTACGACGCAACGACCACGGGCAACGCGATTTACATCGATGGCGTGGCGCTGAAGGCCGGCACTGGCACCAATAC CACGGCTGCGGGTTCGCTGCAGGGCCTGATGCAGGTTCGCGACGATCTGGCGCCGACGATGCAGAGCCAGCTCGACGAAA TCGCGCGTGGTCTCATCACCATGTTTGCGGAAAAGCCGGCAGACCCGACCAGCGGCCTGCCGAACATGCCGGGCTTGTTC ACCTACGGCTCGCCGGCCGCGACGACCATTCCGCCAGACGGAGTTGTCTCTCCCGGGCTCGCAGCCAGCATTACCGTCAA CCCGGCGTTAATTATTTCCAAAGGTGGCAATCCGGAATTGTTGCGTGATGGCGGCATCAACGGTACCGATTACGTCATAA ACACCGCAACTTCGGGGGGAACCGGTTTTTCCGCCCTGATCCGCAGCTATGTCACTGCTTTTGACGCGCCCATGAATTTT GCCGCGTCGACACGTATCGATACGAATACCAGCATCCTGAAATACGGCACCAACTCGATGGGGTGGCTTGAACAGGAACG TTCCGGTGCGACTTCGGCAAACGAAGCAAAAGGCGCGCTTTATGAGCGCTCCGCCAAGTCTTACTCGAATAATACGGCGG TCAGCCTGGATGAGGAGCTGTCGCTGCTCATGGATATCGAACAATCCTACAAGGCCGCCACGAAACTTGTGACCACCGTC GACGAGATGCTCAAGTCGCTGATGGACATGGTGAGGTAA
Upstream 100 bases:
>100_bases CGTATATACACAGCGAATTCGAAAGTCTTCCAGACTGGATCGGATTTGATGGACGTCCTGATCAATCTGAAGAGATAATA CTTCTCACGAGGACAGATGA
Downstream 100 bases:
>100_bases ACGATGAAAACGTCCTTCATTTCATCGCTGGCAATGCAGAACAGCATGCGCAGCACCATCCTGAAGGCTCAGCTTGAGAT GACCAATCTCAATACCGAGC
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: Flagellar Hook-Associated Protein; Flagellar Hook-Associated FlgK
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MSLTSAMNTAQSIFNNTGKQTDVTSKNIANVGNANYVKRTAILGTTMAGASIVSNGRAQNESLLRQTISSSSLASGQSSV LSGLEEIKSIFGGNNYESSPANYMKELLKSLDGYAAKPSDAALAATAVTSASDVASSLNNASSELQGMRLRADKEMSLQV DKLNGLLAKFEEANNEVKAQTAIGGDASDALDQRETLLKDISSIVGINVVNRPNNDVALYTTDGATLFEIVPRSVTFKTQ PGYDATTTGNAIYIDGVALKAGTGTNTTAAGSLQGLMQVRDDLAPTMQSQLDEIARGLITMFAEKPADPTSGLPNMPGLF TYGSPAATTIPPDGVVSPGLAASITVNPALIISKGGNPELLRDGGINGTDYVINTATSGGTGFSALIRSYVTAFDAPMNF AASTRIDTNTSILKYGTNSMGWLEQERSGATSANEAKGALYERSAKSYSNNTAVSLDEELSLLMDIEQSYKAATKLVTTV DEMLKSLMDMVR
Sequences:
>Translated_492_residues MSLTSAMNTAQSIFNNTGKQTDVTSKNIANVGNANYVKRTAILGTTMAGASIVSNGRAQNESLLRQTISSSSLASGQSSV LSGLEEIKSIFGGNNYESSPANYMKELLKSLDGYAAKPSDAALAATAVTSASDVASSLNNASSELQGMRLRADKEMSLQV DKLNGLLAKFEEANNEVKAQTAIGGDASDALDQRETLLKDISSIVGINVVNRPNNDVALYTTDGATLFEIVPRSVTFKTQ PGYDATTTGNAIYIDGVALKAGTGTNTTAAGSLQGLMQVRDDLAPTMQSQLDEIARGLITMFAEKPADPTSGLPNMPGLF TYGSPAATTIPPDGVVSPGLAASITVNPALIISKGGNPELLRDGGINGTDYVINTATSGGTGFSALIRSYVTAFDAPMNF AASTRIDTNTSILKYGTNSMGWLEQERSGATSANEAKGALYERSAKSYSNNTAVSLDEELSLLMDIEQSYKAATKLVTTV DEMLKSLMDMVR >Mature_491_residues SLTSAMNTAQSIFNNTGKQTDVTSKNIANVGNANYVKRTAILGTTMAGASIVSNGRAQNESLLRQTISSSSLASGQSSVL SGLEEIKSIFGGNNYESSPANYMKELLKSLDGYAAKPSDAALAATAVTSASDVASSLNNASSELQGMRLRADKEMSLQVD KLNGLLAKFEEANNEVKAQTAIGGDASDALDQRETLLKDISSIVGINVVNRPNNDVALYTTDGATLFEIVPRSVTFKTQP GYDATTTGNAIYIDGVALKAGTGTNTTAAGSLQGLMQVRDDLAPTMQSQLDEIARGLITMFAEKPADPTSGLPNMPGLFT YGSPAATTIPPDGVVSPGLAASITVNPALIISKGGNPELLRDGGINGTDYVINTATSGGTGFSALIRSYVTAFDAPMNFA ASTRIDTNTSILKYGTNSMGWLEQERSGATSANEAKGALYERSAKSYSNNTAVSLDEELSLLMDIEQSYKAATKLVTTVD EMLKSLMDMVR
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51489; Mature: 51358
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTSAMNTAQSIFNNTGKQTDVTSKNIANVGNANYVKRTAILGTTMAGASIVSNGRAQN CCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH ESLLRQTISSSSLASGQSSVLSGLEEIKSIFGGNNYESSPANYMKELLKSLDGYAAKPSD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC AALAATAVTSASDVASSLNNASSELQGMRLRADKEMSLQVDKLNGLLAKFEEANNEVKAQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEE TAIGGDASDALDQRETLLKDISSIVGINVVNRPNNDVALYTTDGATLFEIVPRSVTFKTQ EECCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCEEEEECCCCEEEECC PGYDATTTGNAIYIDGVALKAGTGTNTTAAGSLQGLMQVRDDLAPTMQSQLDEIARGLIT CCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFAEKPADPTSGLPNMPGLFTYGSPAATTIPPDGVVSPGLAASITVNPALIISKGGNPEL HHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCE LRDGGINGTDYVINTATSGGTGFSALIRSYVTAFDAPMNFAASTRIDTNTSILKYGTNSM EECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCC GWLEQERSGATSANEAKGALYERSAKSYSNNTAVSLDEELSLLMDIEQSYKAATKLVTTV CHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH DEMLKSLMDMVR HHHHHHHHHHHC >Mature Secondary Structure SLTSAMNTAQSIFNNTGKQTDVTSKNIANVGNANYVKRTAILGTTMAGASIVSNGRAQN CCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH ESLLRQTISSSSLASGQSSVLSGLEEIKSIFGGNNYESSPANYMKELLKSLDGYAAKPSD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC AALAATAVTSASDVASSLNNASSELQGMRLRADKEMSLQVDKLNGLLAKFEEANNEVKAQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEE TAIGGDASDALDQRETLLKDISSIVGINVVNRPNNDVALYTTDGATLFEIVPRSVTFKTQ EECCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCEEEEECCCCEEEECC PGYDATTTGNAIYIDGVALKAGTGTNTTAAGSLQGLMQVRDDLAPTMQSQLDEIARGLIT CCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFAEKPADPTSGLPNMPGLFTYGSPAATTIPPDGVVSPGLAASITVNPALIISKGGNPEL HHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCE LRDGGINGTDYVINTATSGGTGFSALIRSYVTAFDAPMNFAASTRIDTNTSILKYGTNSM EECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCC GWLEQERSGATSANEAKGALYERSAKSYSNNTAVSLDEELSLLMDIEQSYKAATKLVTTV CHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH DEMLKSLMDMVR HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA