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The map label for this gene is 15887884

Identifier: 15887884

GI number: 15887884

Start: 527393

End: 527866

Strand: Reverse

Name: 15887884

Synonym: Atu0536

Alternate gene names: NA

Gene position: 527866-527393 (Counterclockwise)

Preceding gene: 15887885

Following gene: 159184359

Centisome position: 18.58

GC content: 59.07

Gene sequence:

>474_bases
ATGGCTTCAGGCGATTTCCGGCTCTGCGACGTGGTACTGGACGACAGCATCGGCCGGTCCACGCCTGATGTGGAGCATGA
ACGCGCCGTCGCCATTTTCGACCTGATCGAAGAAAACACCTTCGAGCCTGCCGGGCATGACGGCGGGCCGTACCGGCTGC
ACATATCGCTCGTCGATGCCAAGCTGGTCTTCGCGATCAAGACCGAGGACGACAAGGATGTCTCCACCCACATCCTCTCG
CTGACGCCGTTCCGCCGCATCATCAAGGATTATTTCCTGATCTGCGAAAGCTATTACGAGGCAATCCGCTCCTCGACGCC
AAGCCAGATCGAGGCGATCGACATGGGCCGGCGGGGTATCCACAATGATGGTTCGCAGACCCTGATGGACCGGCTATCGG
GCAAGATCAAGGTGGATTTCGATACGGCGCGCCGCCTCTTCACCCTTGTCTGTGTGCTTTATTGGCGGGGTTAG

Upstream 100 bases:

>100_bases
GCGCCAGCTTGCGCCGGCGGCGATCACCCTTGCCCACTCGGAGGGGCTGGACGCGCATGCGCGCTCGGTCTCCATTCGCC
TCAATCCGGAAAGTTAAGCG

Downstream 100 bases:

>100_bases
AGATGAGCGATCCTGCCGCAGCGCCAAACGAGGGACGAGCACCGAAATCGGTCCTCTTTATGTGCGGTATGAATTCCATC
CGCTCCCCCATGGCGGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MASGDFRLCDVVLDDSIGRSTPDVEHERAVAIFDLIEENTFEPAGHDGGPYRLHISLVDAKLVFAIKTEDDKDVSTHILS
LTPFRRIIKDYFLICESYYEAIRSSTPSQIEAIDMGRRGIHNDGSQTLMDRLSGKIKVDFDTARRLFTLVCVLYWRG

Sequences:

>Translated_157_residues
MASGDFRLCDVVLDDSIGRSTPDVEHERAVAIFDLIEENTFEPAGHDGGPYRLHISLVDAKLVFAIKTEDDKDVSTHILS
LTPFRRIIKDYFLICESYYEAIRSSTPSQIEAIDMGRRGIHNDGSQTLMDRLSGKIKVDFDTARRLFTLVCVLYWRG
>Mature_156_residues
ASGDFRLCDVVLDDSIGRSTPDVEHERAVAIFDLIEENTFEPAGHDGGPYRLHISLVDAKLVFAIKTEDDKDVSTHILSL
TPFRRIIKDYFLICESYYEAIRSSTPSQIEAIDMGRRGIHNDGSQTLMDRLSGKIKVDFDTARRLFTLVCVLYWRG

Specific function: Unknown

COG id: COG5328

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0262 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y536_AGRT5 (Q8UHX2)

Other databases:

- EMBL:   AE007869
- PIR:   AD2642
- PIR:   E97424
- RefSeq:   NP_353565.1
- STRING:   Q8UHX2
- GeneID:   1132574
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0536
- eggNOG:   COG5328
- HOGENOM:   HBG294171
- OMA:   IDMARRG
- ProtClustDB:   PRK02853
- BioCyc:   ATUM176299-1:ATU0536-MONOMER
- HAMAP:   MF_00678
- InterPro:   IPR008321
- PIRSF:   PIRSF032146

Pfam domain/function: PF06793 UPF0262

EC number: NA

Molecular weight: Translated: 17799; Mature: 17668

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGDFRLCDVVLDDSIGRSTPDVEHERAVAIFDLIEENTFEPAGHDGGPYRLHISLVDA
CCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEE
KLVFAIKTEDDKDVSTHILSLTPFRRIIKDYFLICESYYEAIRSSTPSQIEAIDMGRRGI
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
HNDGSQTLMDRLSGKIKVDFDTARRLFTLVCVLYWRG
CCCCHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASGDFRLCDVVLDDSIGRSTPDVEHERAVAIFDLIEENTFEPAGHDGGPYRLHISLVDA
CCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEE
KLVFAIKTEDDKDVSTHILSLTPFRRIIKDYFLICESYYEAIRSSTPSQIEAIDMGRRGI
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
HNDGSQTLMDRLSGKIKVDFDTARRLFTLVCVLYWRG
CCCCHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194