Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184359
Identifier: 159184359
GI number: 159184359
Start: 526902
End: 527390
Strand: Reverse
Name: 159184359
Synonym: Atu0535
Alternate gene names: NA
Gene position: 527390-526902 (Counterclockwise)
Preceding gene: 15887884
Following gene: 159184358
Centisome position: 18.56
GC content: 57.46
Gene sequence:
>489_bases ATGAGCGATCCTGCCGCAGCGCCAAACGAGGGACGAGCACCGAAATCGGTCCTCTTTATGTGCGGTATGAATTCCATCCG CTCCCCCATGGCGGAGGTCATCGCCAAACGGCTGGTGGCATCAGGCATCTACATACAGTCGGCCGGCGTGCGGGCGGGCG AACGCGATCCCTTCGTGGATGCGGTGCTGGAAGAGCAGGGTTTTTCGCTCGGCAAACACAAACCGCGCACCCTAGACGAG ATTGAGGATGATTTTTTCGATCTGATCATTACATTAACACCCGAAGCCCATCACGCCGCACTGGAGCTGACGCGCTCGAA TTCTCTCGATGTGGTCTATTGGCCAACGATGGATCCGACGGTCATTACAGGTACGCGGGAGCAGATACTCGACGCCTATC GCGAGGTGCGGGATCATCTTGCAAAACTGATTGCCGAACGCCTGCCAAAGCGGCAGCAGCCGGTGGCGGATGCGCTTTCA AAAGACTGA
Upstream 100 bases:
>100_bases AGACCCTGATGGACCGGCTATCGGGCAAGATCAAGGTGGATTTCGATACGGCGCGCCGCCTCTTCACCCTTGTCTGTGTG CTTTATTGGCGGGGTTAGAG
Downstream 100 bases:
>100_bases AAACTGCCCTTACATCGGGAAAATCGGTACTGATTTTTAAGCCGATGCTTTAGAGGTTCACAAATGTGCCGGGATTGTGT AGTTTCCGCGCAATTTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Arsenate Reductase; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Protein-Tyrosine Phosphatase Low Molecular Weight; Arsenate Reductase Protein; Protein-Tyrosine-Phosphatase; Phosphotyrosine Protein Phosphatase; ArsC Protein; Protein-Tyrosine Phosphatase; Low Molecular Weight Tyrosine Phosphatase Protein
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSDPAAAPNEGRAPKSVLFMCGMNSIRSPMAEVIAKRLVASGIYIQSAGVRAGERDPFVDAVLEEQGFSLGKHKPRTLDE IEDDFFDLIITLTPEAHHAALELTRSNSLDVVYWPTMDPTVITGTREQILDAYREVRDHLAKLIAERLPKRQQPVADALS KD
Sequences:
>Translated_162_residues MSDPAAAPNEGRAPKSVLFMCGMNSIRSPMAEVIAKRLVASGIYIQSAGVRAGERDPFVDAVLEEQGFSLGKHKPRTLDE IEDDFFDLIITLTPEAHHAALELTRSNSLDVVYWPTMDPTVITGTREQILDAYREVRDHLAKLIAERLPKRQQPVADALS KD >Mature_161_residues SDPAAAPNEGRAPKSVLFMCGMNSIRSPMAEVIAKRLVASGIYIQSAGVRAGERDPFVDAVLEEQGFSLGKHKPRTLDEI EDDFFDLIITLTPEAHHAALELTRSNSLDVVYWPTMDPTVITGTREQILDAYREVRDHLAKLIAERLPKRQQPVADALSK D
Specific function: Unknown
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17941; Mature: 17809
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPAAAPNEGRAPKSVLFMCGMNSIRSPMAEVIAKRLVASGIYIQSAGVRAGERDPFVD CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHH AVLEEQGFSLGKHKPRTLDEIEDDFFDLIITLTPEAHHAALELTRSNSLDVVYWPTMDPT HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCCCE VITGTREQILDAYREVRDHLAKLIAERLPKRQQPVADALSKD EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC >Mature Secondary Structure SDPAAAPNEGRAPKSVLFMCGMNSIRSPMAEVIAKRLVASGIYIQSAGVRAGERDPFVD CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHH AVLEEQGFSLGKHKPRTLDEIEDDFFDLIITLTPEAHHAALELTRSNSLDVVYWPTMDPT HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCCCE VITGTREQILDAYREVRDHLAKLIAERLPKRQQPVADALSKD EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA