Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887794
Identifier: 15887794
GI number: 15887794
Start: 439628
End: 440125
Strand: Direct
Name: 15887794
Synonym: Atu0445
Alternate gene names: NA
Gene position: 439628-440125 (Clockwise)
Preceding gene: 15887792
Following gene: 159184307
Centisome position: 15.47
GC content: 61.04
Gene sequence:
>498_bases ATGATTTCAAACGCATGGTTTCACCGCATCAAAGCCGCGCAACGTGACCTTATCCGCCTCGTGGGCGGTATCGAGCGTGC TGCGGAAATTTCCTCGATCTCGAAAAGCCACATCGGGCGCATGAACAATGCGACCGACCCGGAATTGATGCCGCTGCACG CTGTCTATGCGCTGGAAAGCGAATGCGGCGTGCCGGTCGTCACCTCTGCGATGGCGGAACTTAACGGGCGGCGGCTGGCC GACCCGGAAAATGAGCGCGCCGCCGAACAGTGCGTCGTCGTCACCTATTCCGAAATGGTGCGCAAGGCTGGCGATCTGAT TTCCGGCGGCGCAGTTGCTATTGCCGACATGGTTGTGACGCCAGCCGAAGCGACCAAAATGGACCGTGACGCGGCGGAAC TGGGAGCCGGTCTGGCCGCATTTCGCAAGGCGCTCGCCAGTGTGAAAGCCAAGGGCGGTCACAAGGTCGGGCTTAGCGTT GTCGGGGGTGCGGAATGA
Upstream 100 bases:
>100_bases GCCTCCGTAACTTCCTGACGCCCTGAAACTCTCATCTCCAATCAATTCCCACCACGGGAAAAACGCCGGGATTTTCCCGG CGCGGGAAAGGTATTGTCTC
Downstream 100 bases:
>100_bases AGCGCCAGACCGATCCGGCTATCACCGAACTGATGAAGCGCCCCTTGTCCGAACGTGCAAGGGGCTTTTTGCGGCATGTG AAATGCGAGGGCGGCAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MISNAWFHRIKAAQRDLIRLVGGIERAAEISSISKSHIGRMNNATDPELMPLHAVYALESECGVPVVTSAMAELNGRRLA DPENERAAEQCVVVTYSEMVRKAGDLISGGAVAIADMVVTPAEATKMDRDAAELGAGLAAFRKALASVKAKGGHKVGLSV VGGAE
Sequences:
>Translated_165_residues MISNAWFHRIKAAQRDLIRLVGGIERAAEISSISKSHIGRMNNATDPELMPLHAVYALESECGVPVVTSAMAELNGRRLA DPENERAAEQCVVVTYSEMVRKAGDLISGGAVAIADMVVTPAEATKMDRDAAELGAGLAAFRKALASVKAKGGHKVGLSV VGGAE >Mature_165_residues MISNAWFHRIKAAQRDLIRLVGGIERAAEISSISKSHIGRMNNATDPELMPLHAVYALESECGVPVVTSAMAELNGRRLA DPENERAAEQCVVVTYSEMVRKAGDLISGGAVAIADMVVTPAEATKMDRDAAELGAGLAAFRKALASVKAKGGHKVGLSV VGGAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17310; Mature: 17310
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISNAWFHRIKAAQRDLIRLVGGIERAAEISSISKSHIGRMNNATDPELMPLHAVYALES CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC ECGVPVVTSAMAELNGRRLADPENERAAEQCVVVTYSEMVRKAGDLISGGAVAIADMVVT CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC PAEATKMDRDAAELGAGLAAFRKALASVKAKGGHKVGLSVVGGAE CHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCC >Mature Secondary Structure MISNAWFHRIKAAQRDLIRLVGGIERAAEISSISKSHIGRMNNATDPELMPLHAVYALES CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC ECGVPVVTSAMAELNGRRLADPENERAAEQCVVVTYSEMVRKAGDLISGGAVAIADMVVT CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC PAEATKMDRDAAELGAGLAAFRKALASVKAKGGHKVGLSVVGGAE CHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA