Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184307
Identifier: 159184307
GI number: 159184307
Start: 440613
End: 441758
Strand: Direct
Name: 159184307
Synonym: Atu0446
Alternate gene names: NA
Gene position: 440613-441758 (Clockwise)
Preceding gene: 15887794
Following gene: 15887796
Centisome position: 15.51
GC content: 61.52
Gene sequence:
>1146_bases ATGCCGGAACGCGAAACGGAAACCGCCGTGGTGCCGGTCGTGGACGCTTCCGGATTGGTCGCCACGGTAGAGCGGGCGCG TGCGCTGCTGGACGAAGGCGACGTTATGAACGCCCGCATCGTCGCATCGGTCGCCTATAATCAGGCGAAGACCGCCGCGC AATTCGCCGAACAGATCGGCGCAACCGAAAAGCTGGTCGCCAAGGCTCGGCGCATGCAGGCCGACGCGCTTTTGATCGAA GCCCGCGCGAAAATCCTCATTGCCGACAAATGGGATGAGGCGAAAGCGGCGGGAACTGCATCTTCCGGCGGCAGGCCGAA AACCACTTCCGATGGAAGTGGTTTTTTCGTTGCTGACACGGGACTCTCAAGTAAGGAACTTGTTGAGGCCCGCAAGCTCG CTGCGGCGGAACATCGTGAACCCGGCATTGTAGAGCGTGCAATTCAGGCGCGTCTTGCCGCCGGGCTGGAACCGACGAAG GCTAACCTTCGTGCGGCGGTCGGCACGGCCAGCGCCACGAAGGAAGAGCGCGGGGCGAACCTCTACGAGACGCCGCCGGA AGCGATGTTTACGCTGTTGGCGCTGGAAGAATTTTCCGCATGCGTGCTGGAACCCGCCTGCGGACGCGGTGCCATCTCGC GCATGCTGGAAGCGTTTCACTACGGCGTCGTGTTGGCCGATATCAACGATTACGGTACGGCGGATAGCAACGGCGAATTG CAGGCGGTGCAGGATTTCTTGACCTCGCAGCCGGACGAACCGGGTTCGTACGATATCGTCACCAATCCGCCCTACGGCGA CGTGCTGAACGCCTTCGTCGCCCACGCCCTGCGGATTTACCAGCCGCGCAAGATGGCGCTTTTGCTCAATCTGAATTTCC TCTGCGGGTTCGCGGACGACGACCGCAATTTCGTTATGGACGATTGCCCGCCCGCACGCGTCTACGTTTTCAAGCGCCGT CTCCCGATGATGCACCGCGACGGATGGGAAGGAAACAAAGCCAGCAGCCGCATGAATACGGCGTGGTTTGTTTGGGAGCG TGACGAGTCCGGAAATTACGGCAGCGCCACCGTGGTCCGCCGTGTGGATTGGAAGGATTTCCAGCCGCAGGAAACCGCCG TCACGGCGGAAAGCGAGGCGGCATGA
Upstream 100 bases:
>100_bases TTACCTGACGCGGGACAAGAAAGACGCCAAGACCTATTACCCGACCGACCGCGCCCGCGAAATGCTGGCGATGCTGGAAG GCATTGCGGAGCCGGGCGAC
Downstream 100 bases:
>100_bases TGACCATCGCTTTCTTCATAGTCGGTTTGTTGACCTGCCTTTGCGCGGGCGTCCGTTTCAACGAATGCCGCCTTGATCTG GTCAGTGGGTCGATCTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPERETETAVVPVVDASGLVATVERARALLDEGDVMNARIVASVAYNQAKTAAQFAEQIGATEKLVAKARRMQADALLIE ARAKILIADKWDEAKAAGTASSGGRPKTTSDGSGFFVADTGLSSKELVEARKLAAAEHREPGIVERAIQARLAAGLEPTK ANLRAAVGTASATKEERGANLYETPPEAMFTLLALEEFSACVLEPACGRGAISRMLEAFHYGVVLADINDYGTADSNGEL QAVQDFLTSQPDEPGSYDIVTNPPYGDVLNAFVAHALRIYQPRKMALLLNLNFLCGFADDDRNFVMDDCPPARVYVFKRR LPMMHRDGWEGNKASSRMNTAWFVWERDESGNYGSATVVRRVDWKDFQPQETAVTAESEAA
Sequences:
>Translated_381_residues MPERETETAVVPVVDASGLVATVERARALLDEGDVMNARIVASVAYNQAKTAAQFAEQIGATEKLVAKARRMQADALLIE ARAKILIADKWDEAKAAGTASSGGRPKTTSDGSGFFVADTGLSSKELVEARKLAAAEHREPGIVERAIQARLAAGLEPTK ANLRAAVGTASATKEERGANLYETPPEAMFTLLALEEFSACVLEPACGRGAISRMLEAFHYGVVLADINDYGTADSNGEL QAVQDFLTSQPDEPGSYDIVTNPPYGDVLNAFVAHALRIYQPRKMALLLNLNFLCGFADDDRNFVMDDCPPARVYVFKRR LPMMHRDGWEGNKASSRMNTAWFVWERDESGNYGSATVVRRVDWKDFQPQETAVTAESEAA >Mature_380_residues PERETETAVVPVVDASGLVATVERARALLDEGDVMNARIVASVAYNQAKTAAQFAEQIGATEKLVAKARRMQADALLIEA RAKILIADKWDEAKAAGTASSGGRPKTTSDGSGFFVADTGLSSKELVEARKLAAAEHREPGIVERAIQARLAAGLEPTKA NLRAAVGTASATKEERGANLYETPPEAMFTLLALEEFSACVLEPACGRGAISRMLEAFHYGVVLADINDYGTADSNGELQ AVQDFLTSQPDEPGSYDIVTNPPYGDVLNAFVAHALRIYQPRKMALLLNLNFLCGFADDDRNFVMDDCPPARVYVFKRRL PMMHRDGWEGNKASSRMNTAWFVWERDESGNYGSATVVRRVDWKDFQPQETAVTAESEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41368; Mature: 41237
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERETETAVVPVVDASGLVATVERARALLDEGDVMNARIVASVAYNQAKTAAQFAEQIG CCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHEEEHHHHHHHHHHHHHHHHHC ATEKLVAKARRMQADALLIEARAKILIADKWDEAKAAGTASSGGRPKTTSDGSGFFVADT CHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEEEEEC GLSSKELVEARKLAAAEHREPGIVERAIQARLAAGLEPTKANLRAAVGTASATKEERGAN CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCC LYETPPEAMFTLLALEEFSACVLEPACGRGAISRMLEAFHYGVVLADINDYGTADSNGEL CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCH QAVQDFLTSQPDEPGSYDIVTNPPYGDVLNAFVAHALRIYQPRKMALLLNLNFLCGFADD HHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCC DRNFVMDDCPPARVYVFKRRLPMMHRDGWEGNKASSRMNTAWFVWERDESGNYGSATVVR CCCEEECCCCCHHEEHHHHHCCCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEE RVDWKDFQPQETAVTAESEAA ECCCCCCCCCHHEECCCCCCC >Mature Secondary Structure PERETETAVVPVVDASGLVATVERARALLDEGDVMNARIVASVAYNQAKTAAQFAEQIG CCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHEEEHHHHHHHHHHHHHHHHHC ATEKLVAKARRMQADALLIEARAKILIADKWDEAKAAGTASSGGRPKTTSDGSGFFVADT CHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEEEEEC GLSSKELVEARKLAAAEHREPGIVERAIQARLAAGLEPTKANLRAAVGTASATKEERGAN CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCC LYETPPEAMFTLLALEEFSACVLEPACGRGAISRMLEAFHYGVVLADINDYGTADSNGEL CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCH QAVQDFLTSQPDEPGSYDIVTNPPYGDVLNAFVAHALRIYQPRKMALLLNLNFLCGFADD HHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCC DRNFVMDDCPPARVYVFKRRLPMMHRDGWEGNKASSRMNTAWFVWERDESGNYGSATVVR CCCEEECCCCCHHEEHHHHHCCCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEE RVDWKDFQPQETAVTAESEAA ECCCCCCCCCHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA