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The map label for this gene is 15887747

Identifier: 15887747

GI number: 15887747

Start: 392498

End: 393535

Strand: Direct

Name: 15887747

Synonym: Atu0398

Alternate gene names: NA

Gene position: 392498-393535 (Clockwise)

Preceding gene: 159184291

Following gene: 159184292

Centisome position: 13.81

GC content: 60.79

Gene sequence:

>1038_bases
ATGCGTTGGAAACGCACCCTCCAGCTTCTCGATGTTCATTGCGAAGGCGAAATCGGCCGTGTCGTCACCGGCGGCGCACC
GAAAATACCCGGCAACACGGTGGCCGAGCAATTGCATTGGATGAACACCGATCCGCAAGGAGAAGCCTTGCGCCGCTTCC
TGACGCTGGAGCCGCGCGGCACGCCCATGGGGTCGGTCGATCTCCTCCTGCCGCCGAAACATCCGGATGCGCATGCCGCC
TTCGTCATTCTGCAGCCGGATCAGGCGCATGCCAGTTCGGGTTCGAATTCCATTTGCGCGACGACCGCGCTTCTGGAAAG
CGGCATGGTCGAGATGCAGGAGCCGGAAACCGTCATTATTCTGGAAACGGCCGCCGGCCTCGTCAAAGCGACGGCCACCT
GCCGGGACGGACGCTGCGAAAAGGTCAAGCTGACCATGGTGCCGTCCTTCGTGCATGAGCTGGATGTCAGCATCGATACG
CCCGAATGGGGCAGGGTGACGATGGACATTTCCTATGGCGGCATTTTTTACGCACTCGTCGATGTCCGTCAGATCGGTCT
CACCATTGAGAAGGCCAATGCTGCGAAACTCGTTGCCGCCGGTATGACTCTGAAGGACCTCGTCAACCGTGAAATGACGG
TCGTTCATCCGGAAATCCCTGCCATATCAGGCGTCGCTTATGTCATGTTCCGGGATGTTGATGCCGACGGCTCGATCCGC
ACCTGCACGACCATGTGGCCGGGCCGCGCGGATCGCTCGCCCTGTGGCACCGGCAATTCCGCCAATCTTGCCACGCTTTA
TGCGCGCGGCAAGGTGAAGGTGGGAGACGAATATAAATCCCGCTCGATCATCGGGTCGGAATTCGATGTCGGCCTTTCCG
CCGTTACCGAAGTGGCCGGCCGTCCGGCCGTCATTCCCACCATTGCCGGGCGCGGCTTCACCTTCGGTCTGCATCAGGTT
GGCCTCGATCCCTTCGACCCGCTGGGCGATGGTTTCGCCATGACCGATGTCTGGGGTCCGGAAGCGGGCAACATCTGA

Upstream 100 bases:

>100_bases
CGTCAGGCGTTTTTGTCATTGCCCTTCCGCAGATTTGTATACAGCTTGTATTTTTATCTGTATGGTCGGGCCTTCAACCC
AACTTCCGGAGTAGACCCCC

Downstream 100 bases:

>100_bases
CGCACGCTTCAAAAAAATGACATTTACAGCTGCCGGATGGTCTCTGGCGGCTGTTTTCCCGCGACAAAAGATGCTAAGCG
GGCGCAATTCCATCATGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRWKRTLQLLDVHCEGEIGRVVTGGAPKIPGNTVAEQLHWMNTDPQGEALRRFLTLEPRGTPMGSVDLLLPPKHPDAHAA
FVILQPDQAHASSGSNSICATTALLESGMVEMQEPETVIILETAAGLVKATATCRDGRCEKVKLTMVPSFVHELDVSIDT
PEWGRVTMDISYGGIFYALVDVRQIGLTIEKANAAKLVAAGMTLKDLVNREMTVVHPEIPAISGVAYVMFRDVDADGSIR
TCTTMWPGRADRSPCGTGNSANLATLYARGKVKVGDEYKSRSIIGSEFDVGLSAVTEVAGRPAVIPTIAGRGFTFGLHQV
GLDPFDPLGDGFAMTDVWGPEAGNI

Sequences:

>Translated_345_residues
MRWKRTLQLLDVHCEGEIGRVVTGGAPKIPGNTVAEQLHWMNTDPQGEALRRFLTLEPRGTPMGSVDLLLPPKHPDAHAA
FVILQPDQAHASSGSNSICATTALLESGMVEMQEPETVIILETAAGLVKATATCRDGRCEKVKLTMVPSFVHELDVSIDT
PEWGRVTMDISYGGIFYALVDVRQIGLTIEKANAAKLVAAGMTLKDLVNREMTVVHPEIPAISGVAYVMFRDVDADGSIR
TCTTMWPGRADRSPCGTGNSANLATLYARGKVKVGDEYKSRSIIGSEFDVGLSAVTEVAGRPAVIPTIAGRGFTFGLHQV
GLDPFDPLGDGFAMTDVWGPEAGNI
>Mature_345_residues
MRWKRTLQLLDVHCEGEIGRVVTGGAPKIPGNTVAEQLHWMNTDPQGEALRRFLTLEPRGTPMGSVDLLLPPKHPDAHAA
FVILQPDQAHASSGSNSICATTALLESGMVEMQEPETVIILETAAGLVKATATCRDGRCEKVKLTMVPSFVHELDVSIDT
PEWGRVTMDISYGGIFYALVDVRQIGLTIEKANAAKLVAAGMTLKDLVNREMTVVHPEIPAISGVAYVMFRDVDADGSIR
TCTTMWPGRADRSPCGTGNSANLATLYARGKVKVGDEYKSRSIIGSEFDVGLSAVTEVAGRPAVIPTIAGRGFTFGLHQV
GLDPFDPLGDGFAMTDVWGPEAGNI

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=344, Percent_Identity=29.6511627906977, Blast_Score=127, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 36954; Mature: 36954

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWKRTLQLLDVHCEGEIGRVVTGGAPKIPGNTVAEQLHWMNTDPQGEALRRFLTLEPRG
CCHHHEEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHEEECCCC
TPMGSVDLLLPPKHPDAHAAFVILQPDQAHASSGSNSICATTALLESGMVEMQEPETVII
CCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCEEEE
LETAAGLVKATATCRDGRCEKVKLTMVPSFVHELDVSIDTPEWGRVTMDISYGGIFYALV
EECCCCHHEEEECCCCCCCCEEEEEECHHHHHHHCCEECCCCCCEEEEEEECCCEEEHHH
DVRQIGLTIEKANAAKLVAAGMTLKDLVNREMTVVHPEIPAISGVAYVMFRDVDADGSIR
HHHHHCEEEECCCCEEEEECCCCHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCEE
TCTTMWPGRADRSPCGTGNSANLATLYARGKVKVGDEYKSRSIIGSEFDVGLSAVTEVAG
EEEEECCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHCC
RPAVIPTIAGRGFTFGLHQVGLDPFDPLGDGFAMTDVWGPEAGNI
CCEEEEEECCCCEEEEHHHCCCCCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MRWKRTLQLLDVHCEGEIGRVVTGGAPKIPGNTVAEQLHWMNTDPQGEALRRFLTLEPRG
CCHHHEEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHEEECCCC
TPMGSVDLLLPPKHPDAHAAFVILQPDQAHASSGSNSICATTALLESGMVEMQEPETVII
CCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCEEEE
LETAAGLVKATATCRDGRCEKVKLTMVPSFVHELDVSIDTPEWGRVTMDISYGGIFYALV
EECCCCHHEEEECCCCCCCCEEEEEECHHHHHHHCCEECCCCCCEEEEEEECCCEEEHHH
DVRQIGLTIEKANAAKLVAAGMTLKDLVNREMTVVHPEIPAISGVAYVMFRDVDADGSIR
HHHHHCEEEECCCCEEEEECCCCHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCEE
TCTTMWPGRADRSPCGTGNSANLATLYARGKVKVGDEYKSRSIIGSEFDVGLSAVTEVAG
EEEEECCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHCC
RPAVIPTIAGRGFTFGLHQVGLDPFDPLGDGFAMTDVWGPEAGNI
CCEEEEEECCCCEEEEHHHCCCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]