Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887723
Identifier: 15887723
GI number: 15887723
Start: 365886
End: 366806
Strand: Direct
Name: 15887723
Synonym: Atu0372
Alternate gene names: NA
Gene position: 365886-366806 (Clockwise)
Preceding gene: 15887719
Following gene: 159184278
Centisome position: 12.88
GC content: 57.98
Gene sequence:
>921_bases GTGTTGGAAAGGCGTCAATGTGATTTGGGTGATTTGGCGCGCCAGACGAAAGGCATGGAAATGACACGACTGAAAAACGG CAAATTGCGGCGCAAGGACGGGGCATGGGACCCGTTGAAGCGCAGTGCTGTGGACAAGCAGCAGGCCGAGGTCGTCGTCA AAACGCCGCAGTCGGATTCCCCGTCCTATCGGCTGGCCTATGTGGATACGGACTTTCTCTGCCGTGAGGAATTGCGCCCG ATCAGGCTGCAGCTGGAACTTCTGAAGACGGAAATGGCGCTTACCGAGCGCGGGATCAATTCCACCGTCGTGATGTTCGG CGGCGCCCGCATTCCCGAACCGGGCGGCGACGCCTGGGCGGCACGCAACGAAACGCAGAAGCGCAATCTGGAACAATCCT CGATTTATTACGAGGAGGCGCGCAAGTTTGCTCGCCTCTGCACCGACTATGGCGCGAAGTCCGGCCATCTGGAATATGTC GTGGTCACCGGCGGTGGTCCCGGCGTCATGGAAGCGGGCAATCGTGGTGCTGCCGATGTGGGAGGCCCGTCGATCGGCCT CAATATCGTTCTGCCGCACGAGCAGGCGCCCAACCCCTATGTCACGCCGGAGCTGAGCTTCAATTTCCACTATTTCGCCA TCCGGAAAATGCACTTCCTGATGCGGGCGAAGGCCGTCGTGGTTTTCCCCGGTGGCTTTGGTACGCTGGATGAGCTTTTT GAGGCACTGACGCTGATCCAGACCAAACGTATGGCACCTATCCCCCTCATTCTTTTTGGTGAAAACTTCTGGCGATCCGT CGTCAACTTCGAGTTCCTGGCGAATTTCGGCACCATCGCTCCCGAGGATATGGATTTGCTGCACTTTGCCGAGACGGCGG ATGATGCCTGGAAGATTATCTCCGAATACTACGAGCACTGA
Upstream 100 bases:
>100_bases AAGATCCGTAAGGCTCATGGAAAATTCCTTGAATGTCGCGTGTGGTCCGGTCACGGAAGGCCCGCGCCGCTGGAAGGCTC TGGCCATTTGATCTAAGGGA
Downstream 100 bases:
>100_bases TTATTCTTAGCGCGGCGAAGTAATATTAGGGCTTAATTAGCAATCATATTCTAATTTTGCGTCGTCGCGCTGCAGCGCAC TGTCCCATGCGGACGGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLERRQCDLGDLARQTKGMEMTRLKNGKLRRKDGAWDPLKRSAVDKQQAEVVVKTPQSDSPSYRLAYVDTDFLCREELRP IRLQLELLKTEMALTERGINSTVVMFGGARIPEPGGDAWAARNETQKRNLEQSSIYYEEARKFARLCTDYGAKSGHLEYV VVTGGGPGVMEAGNRGAADVGGPSIGLNIVLPHEQAPNPYVTPELSFNFHYFAIRKMHFLMRAKAVVVFPGGFGTLDELF EALTLIQTKRMAPIPLILFGENFWRSVVNFEFLANFGTIAPEDMDLLHFAETADDAWKIISEYYEH
Sequences:
>Translated_306_residues MLERRQCDLGDLARQTKGMEMTRLKNGKLRRKDGAWDPLKRSAVDKQQAEVVVKTPQSDSPSYRLAYVDTDFLCREELRP IRLQLELLKTEMALTERGINSTVVMFGGARIPEPGGDAWAARNETQKRNLEQSSIYYEEARKFARLCTDYGAKSGHLEYV VVTGGGPGVMEAGNRGAADVGGPSIGLNIVLPHEQAPNPYVTPELSFNFHYFAIRKMHFLMRAKAVVVFPGGFGTLDELF EALTLIQTKRMAPIPLILFGENFWRSVVNFEFLANFGTIAPEDMDLLHFAETADDAWKIISEYYEH >Mature_306_residues MLERRQCDLGDLARQTKGMEMTRLKNGKLRRKDGAWDPLKRSAVDKQQAEVVVKTPQSDSPSYRLAYVDTDFLCREELRP IRLQLELLKTEMALTERGINSTVVMFGGARIPEPGGDAWAARNETQKRNLEQSSIYYEEARKFARLCTDYGAKSGHLEYV VVTGGGPGVMEAGNRGAADVGGPSIGLNIVLPHEQAPNPYVTPELSFNFHYFAIRKMHFLMRAKAVVVFPGGFGTLDELF EALTLIQTKRMAPIPLILFGENFWRSVVNFEFLANFGTIAPEDMDLLHFAETADDAWKIISEYYEH
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34470; Mature: 34470
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERRQCDLGDLARQTKGMEMTRLKNGKLRRKDGAWDPLKRSAVDKQQAEVVVKTPQSDS CCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCC PSYRLAYVDTDFLCREELRPIRLQLELLKTEMALTERGINSTVVMFGGARIPEPGGDAWA CCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC ARNETQKRNLEQSSIYYEEARKFARLCTDYGAKSGHLEYVVVTGGGPGVMEAGNRGAADV CCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC GGPSIGLNIVLPHEQAPNPYVTPELSFNFHYFAIRKMHFLMRAKAVVVFPGGFGTLDELF CCCCCEEEEEECCCCCCCCCCCCEECCCEEHHHHHHHHHHHHCCEEEEECCCCCCHHHHH EALTLIQTKRMAPIPLILFGENFWRSVVNFEFLANFGTIAPEDMDLLHFAETADDAWKII HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH SEYYEH HHHHCC >Mature Secondary Structure MLERRQCDLGDLARQTKGMEMTRLKNGKLRRKDGAWDPLKRSAVDKQQAEVVVKTPQSDS CCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCC PSYRLAYVDTDFLCREELRPIRLQLELLKTEMALTERGINSTVVMFGGARIPEPGGDAWA CCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC ARNETQKRNLEQSSIYYEEARKFARLCTDYGAKSGHLEYVVVTGGGPGVMEAGNRGAADV CCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC GGPSIGLNIVLPHEQAPNPYVTPELSFNFHYFAIRKMHFLMRAKAVVVFPGGFGTLDELF CCCCCEEEEEECCCCCCCCCCCCEECCCEEHHHHHHHHHHHHCCEEEEECCCCCCHHHHH EALTLIQTKRMAPIPLILFGENFWRSVVNFEFLANFGTIAPEDMDLLHFAETADDAWKII HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH SEYYEH HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA