Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is chvG
Identifier: 15887391
GI number: 15887391
Start: 34679
End: 36469
Strand: Reverse
Name: chvG
Synonym: Atu0033
Alternate gene names: 15887391
Gene position: 36469-34679 (Counterclockwise)
Preceding gene: 159184131
Following gene: 15887390
Centisome position: 1.28
GC content: 60.64
Gene sequence:
>1791_bases GTGTTGAAGAAAACGCCGGAAACCGTCTCGGACAGTGACGATGCCGAAGAACGCGGCAGCGAACGCCGCCATCGTATCCA TCCGCTGACGATCATCCGGCGCATTTTCGGCAATGCGGTGTTTTCCAGCCTCACGCGCCGTATCCTCTTCTTCAATGTCG CCGCGACCGTGGTTCTGGTCGGCGGCATTCTCTACCTCAACCAGTTCCGTGAAGGGCTGATCGACGCGCGCGTGGAAAGC CTGTTGACGCAGGGCGAAATCATCGCCGGCGCGGTCTCCGCTTCCGCATCGGTCGATACCAACTCGATCACCATCAATCC GGAAAAACTGCTCGAATTGCAGGCGGGGCAGAGCATCACCCCTGCCCCCAACGACGAGGATCTGAGTTTCCCGATCAACC CGGAGCGAGTGGCGCCTGTGCTGCGGCGTCTGATTTCGCCGACACGCACGCGCGCGCGGCTGTTCGATGCCGATGCCAAT CTGTTGCTCGATTCCCGCCACCTTTATTCACGCGGACAGGTTCTGCGCTTCGATCTGCCGCCGGTGACGCCGGAAACCCA GACTTGGGGTGACTGGTTCACCAGCATGTTCAACCGCATGCTGCAGCCGAGCAGCCTGCCGCAATACAAGGAAGCGCCGG GTGGCGATGGCTCGATCTATCCAGAAGTGATGAATGCGCTGACGGGGGTTCGCGGCGCGGTCGTGCGCGTGACCGAAAAG GGTGAGCTGATCGTTTCGGTCGCCGTGCCGGTTCAGCGCTTCCGGGCCGTACTAGGCGTATTGCTTTTGTCCACCCAGGC GGGAGATATCGACAAGATCGTGCATGCCGAGCGCCTTGCCATCATGCGCGTCTTCGGCATCGCCACGCTGGTCAATATCG TGTTGTCACTGCTTTTATCCTCCACCATCGCCACGCCGCTAAGACGCCTTTCGGCGGCCGCGATCCGCGTGCGCCGCGGG GCGAGAACGCGTGAGGAAATACCGGATTTCTCAGCGCGTCAGGACGAGATCGGAAACCTCTCCATAGCGTTGCGTGAAAT GACGACGGCGCTCTACGACCGTATCGACGCCATCGAAAGTTTCGCCGCCGACGTCAGCCATGAACTCAAGAACCCGCTGA CCTCGCTGCGCAGCGCCGTGGAAACCCTGCCACGCGCCAAGACCGAAGAGTCCAAACAGCGGCTGACCGAAATCATCTTC CATGACGTTCGGCGCCTCGATCGCCTGATCAGCGATATTTCGGACGCGTCGCGCCTCGATGCCGAGCTGGCGCGCGCCGA TGCTTCGCCACTCGACCTCGATGTGCTGATGAAGGGTCTGGTGGACATATCCCGCCAGATCAGCACCAAGAAAAAGAGCG TGGCGATCGATTATGTCGCCGACCGGAAGGCCGGAGCCAAAACCTCTTTCGTAGTCAACGGCCACGATCTTCGTATCGGG CAGATTGTCACCAACCTTATCGAGAATGCACGTTCTTTCGTTTCGGAGGAAAGCGGCCGCATCACCGTGCGCCTTTCCCG CCACAAGGACCGCTGCATCGTGCAGGTGGAAGACAACGGCCCCGGCATTCAGGCAGAAGATATCGACCGAATTTTCGAGC GGTTTTATACAGACCGGCCGGCCAGCGAAGGTTTCGGCCAGAATTCCGGCCTTGGCCTTTCCATCAGCCGCCAGATCGCG GAAGCCCATGGCGGCAGCCTCCGGGCGGAAAACGTGGTCGACAAATACGGCGTTATATCAGGCGCGCGCTTCACCCTGTC GCTGCCGGCGGCCGAAACCCATGAACGCTGA
Upstream 100 bases:
>100_bases GAAACGCTTTATGGCGTAGGATATCGCTTCCGCGAAGCGGCTTAAAGAAGCCGACTCAAGCAGAAGGGACCGCCCGAACC GGGCGTGAGGACTTTAATAC
Downstream 100 bases:
>100_bases ACGCTTCAACCTGCATGCGACCGCCATCGTCGTCGACGGCACCGGCATCCTCTTCACGGGTCCGTCGGGAAGCGGCAAGA GCGAGCTCGCCTTCAGCTTT
Product: two component sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MLKKTPETVSDSDDAEERGSERRHRIHPLTIIRRIFGNAVFSSLTRRILFFNVAATVVLVGGILYLNQFREGLIDARVES LLTQGEIIAGAVSASASVDTNSITINPEKLLELQAGQSITPAPNDEDLSFPINPERVAPVLRRLISPTRTRARLFDADAN LLLDSRHLYSRGQVLRFDLPPVTPETQTWGDWFTSMFNRMLQPSSLPQYKEAPGGDGSIYPEVMNALTGVRGAVVRVTEK GELIVSVAVPVQRFRAVLGVLLLSTQAGDIDKIVHAERLAIMRVFGIATLVNIVLSLLLSSTIATPLRRLSAAAIRVRRG ARTREEIPDFSARQDEIGNLSIALREMTTALYDRIDAIESFAADVSHELKNPLTSLRSAVETLPRAKTEESKQRLTEIIF HDVRRLDRLISDISDASRLDAELARADASPLDLDVLMKGLVDISRQISTKKKSVAIDYVADRKAGAKTSFVVNGHDLRIG QIVTNLIENARSFVSEESGRITVRLSRHKDRCIVQVEDNGPGIQAEDIDRIFERFYTDRPASEGFGQNSGLGLSISRQIA EAHGGSLRAENVVDKYGVISGARFTLSLPAAETHER
Sequences:
>Translated_596_residues MLKKTPETVSDSDDAEERGSERRHRIHPLTIIRRIFGNAVFSSLTRRILFFNVAATVVLVGGILYLNQFREGLIDARVES LLTQGEIIAGAVSASASVDTNSITINPEKLLELQAGQSITPAPNDEDLSFPINPERVAPVLRRLISPTRTRARLFDADAN LLLDSRHLYSRGQVLRFDLPPVTPETQTWGDWFTSMFNRMLQPSSLPQYKEAPGGDGSIYPEVMNALTGVRGAVVRVTEK GELIVSVAVPVQRFRAVLGVLLLSTQAGDIDKIVHAERLAIMRVFGIATLVNIVLSLLLSSTIATPLRRLSAAAIRVRRG ARTREEIPDFSARQDEIGNLSIALREMTTALYDRIDAIESFAADVSHELKNPLTSLRSAVETLPRAKTEESKQRLTEIIF HDVRRLDRLISDISDASRLDAELARADASPLDLDVLMKGLVDISRQISTKKKSVAIDYVADRKAGAKTSFVVNGHDLRIG QIVTNLIENARSFVSEESGRITVRLSRHKDRCIVQVEDNGPGIQAEDIDRIFERFYTDRPASEGFGQNSGLGLSISRQIA EAHGGSLRAENVVDKYGVISGARFTLSLPAAETHER >Mature_596_residues MLKKTPETVSDSDDAEERGSERRHRIHPLTIIRRIFGNAVFSSLTRRILFFNVAATVVLVGGILYLNQFREGLIDARVES LLTQGEIIAGAVSASASVDTNSITINPEKLLELQAGQSITPAPNDEDLSFPINPERVAPVLRRLISPTRTRARLFDADAN LLLDSRHLYSRGQVLRFDLPPVTPETQTWGDWFTSMFNRMLQPSSLPQYKEAPGGDGSIYPEVMNALTGVRGAVVRVTEK GELIVSVAVPVQRFRAVLGVLLLSTQAGDIDKIVHAERLAIMRVFGIATLVNIVLSLLLSSTIATPLRRLSAAAIRVRRG ARTREEIPDFSARQDEIGNLSIALREMTTALYDRIDAIESFAADVSHELKNPLTSLRSAVETLPRAKTEESKQRLTEIIF HDVRRLDRLISDISDASRLDAELARADASPLDLDVLMKGLVDISRQISTKKKSVAIDYVADRKAGAKTSFVVNGHDLRIG QIVTNLIENARSFVSEESGRITVRLSRHKDRCIVQVEDNGPGIQAEDIDRIFERFYTDRPASEGFGQNSGLGLSISRQIA EAHGGSLRAENVVDKYGVISGARFTLSLPAAETHER
Specific function: Member of a two-component regulatory system ChvG/ChvI. Activates ChvI by phosphorylation (Potential)
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain
Homologues:
Organism=Escherichia coli, GI1786600, Length=243, Percent_Identity=27.9835390946502, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786783, Length=256, Percent_Identity=27.734375, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI1790346, Length=284, Percent_Identity=26.056338028169, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790861, Length=378, Percent_Identity=24.8677248677249, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1788393, Length=290, Percent_Identity=24.4827586206897, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787894, Length=319, Percent_Identity=27.8996865203762, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI48994928, Length=238, Percent_Identity=26.0504201680672, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790436, Length=238, Percent_Identity=26.890756302521, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI145693157, Length=247, Percent_Identity=23.8866396761134, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788549, Length=262, Percent_Identity=23.6641221374046, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1789808, Length=270, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1788279, Length=320, Percent_Identity=23.75, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI87082128, Length=314, Percent_Identity=28.0254777070064, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789403, Length=294, Percent_Identity=29.5918367346939, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI87081816, Length=274, Percent_Identity=27.7372262773723, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1789149, Length=240, Percent_Identity=27.5, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790551, Length=258, Percent_Identity=26.3565891472868, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1790300, Length=218, Percent_Identity=27.9816513761468, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHVG_AGRT5 (Q07737)
Other databases:
- EMBL: L18860 - EMBL: AE007869 - PIR: A49902 - PIR: AB2581 - PIR: H97362 - RefSeq: NP_353072.1 - ProteinModelPortal: Q07737 - STRING: Q07737 - GeneID: 1132071 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0033 - eggNOG: COG0642 - HOGENOM: HBG294236 - OMA: ILYLNQF - ProtClustDB: CLSK864189 - BioCyc: ATUM176299-1:ATU0033-MONOMER - BRENDA: 2.7.13.3 - InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - Gene3D: G3DSA:3.30.565.10 - PRINTS: PR00344 - SMART: SM00304 - SMART: SM00387 - SMART: SM00388
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; SSF55874 ATP_bd_ATPase; SSF47384 His_kin_homodim
EC number: =2.7.13.3
Molecular weight: Translated: 65723; Mature: 65723
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: PS50885 HAMP; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x91f9ed4)-; HASH(0xb3c0ff0)-;
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKTPETVSDSDDAEERGSERRHRIHPLTIIRRIFGNAVFSSLTRRILFFNVAATVVLV CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGILYLNQFREGLIDARVESLLTQGEIIAGAVSASASVDTNSITINPEKLLELQAGQSIT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCC PAPNDEDLSFPINPERVAPVLRRLISPTRTRARLFDADANLLLDSRHLYSRGQVLRFDLP CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEECCHHHHCCCCEEEEECC PVTPETQTWGDWFTSMFNRMLQPSSLPQYKEAPGGDGSIYPEVMNALTGVRGAVVRVTEK CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECC GELIVSVAVPVQRFRAVLGVLLLSTQAGDIDKIVHAERLAIMRVFGIATLVNIVLSLLLS CCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STIATPLRRLSAAAIRVRRGARTREEIPDFSARQDEIGNLSIALREMTTALYDRIDAIES HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH FAADVSHELKNPLTSLRSAVETLPRAKTEESKQRLTEIIFHDVRRLDRLISDISDASRLD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELARADASPLDLDVLMKGLVDISRQISTKKKSVAIDYVADRKAGAKTSFVVNGHDLRIG HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEHHCCCCCCCCEEEECCCCCHHH QIVTNLIENARSFVSEESGRITVRLSRHKDRCIVQVEDNGPGIQAEDIDRIFERFYTDRP HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC ASEGFGQNSGLGLSISRQIAEAHGGSLRAENVVDKYGVISGARFTLSLPAAETHER CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCHHCCCH >Mature Secondary Structure MLKKTPETVSDSDDAEERGSERRHRIHPLTIIRRIFGNAVFSSLTRRILFFNVAATVVLV CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGILYLNQFREGLIDARVESLLTQGEIIAGAVSASASVDTNSITINPEKLLELQAGQSIT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCC PAPNDEDLSFPINPERVAPVLRRLISPTRTRARLFDADANLLLDSRHLYSRGQVLRFDLP CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEECCHHHHCCCCEEEEECC PVTPETQTWGDWFTSMFNRMLQPSSLPQYKEAPGGDGSIYPEVMNALTGVRGAVVRVTEK CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECC GELIVSVAVPVQRFRAVLGVLLLSTQAGDIDKIVHAERLAIMRVFGIATLVNIVLSLLLS CCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STIATPLRRLSAAAIRVRRGARTREEIPDFSARQDEIGNLSIALREMTTALYDRIDAIES HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH FAADVSHELKNPLTSLRSAVETLPRAKTEESKQRLTEIIFHDVRRLDRLISDISDASRLD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELARADASPLDLDVLMKGLVDISRQISTKKKSVAIDYVADRKAGAKTSFVVNGHDLRIG HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEHHCCCCCCCCEEEECCCCCHHH QIVTNLIENARSFVSEESGRITVRLSRHKDRCIVQVEDNGPGIQAEDIDRIFERFYTDRP HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC ASEGFGQNSGLGLSISRQIAEAHGGSLRAENVVDKYGVISGARFTLSLPAAETHER CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8407839; 11743193; 11743194