Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is hprK [H]
Identifier: 15887390
GI number: 15887390
Start: 34225
End: 34689
Strand: Reverse
Name: hprK [H]
Synonym: Atu0032
Alternate gene names: 15887390
Gene position: 34689-34225 (Counterclockwise)
Preceding gene: 15887391
Following gene: 15887389
Centisome position: 1.22
GC content: 55.91
Gene sequence:
>465_bases ATGAACGCTGAACGCTTCAACCTGCATGCGACCGCCATCGTCGTCGACGGCACCGGCATCCTCTTCACGGGTCCGTCGGG AAGCGGCAAGAGCGAGCTCGCCTTCAGCTTTTTGACAGAGGCGGAACGGTGCGGATTGCCGGCGGCCCTGATCGCGGACG ATCAGATTTTCGTGTATCGCGACGGCGAAACCATCATCGCCGAGCGGCCGGAAGCAATCGCCGGACTACTGGAATTGCGC GGCAGCGGCATTGTTTCCGTCAAAAGCGTCCCAAGTGGTGTACTACATTTCGCCGTCACGACAGTTCTTTCACCGGAAAA TCCAAGACTTCCCGAAGATGACGAAGCGTTGTTAATGCCCTGCGGTGGGCATCTTCGGCTTCTGCGTATTCCCCTCTCCA GTCTTGTGCCCTATGGAAAGTTTGCTGCACTTGCTCAGAATCTTTTTAAAACGAATGTGAAGTGA
Upstream 100 bases:
>100_bases GAAGCCCATGGCGGCAGCCTCCGGGCGGAAAACGTGGTCGACAAATACGGCGTTATATCAGGCGCGCGCTTCACCCTGTC GCTGCCGGCGGCCGAAACCC
Downstream 100 bases:
>100_bases CCGTGATTCAGGCGATTTTAGGCTTGCGATTCGCATTTTCCTCATCAAGATGAAATCCCACCGATGGACAGGATTGCCGC GTTGCGATAGTCGGCAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: HPrK/P; HPr(Ser) kinase/phosphorylase [H]
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MNAERFNLHATAIVVDGTGILFTGPSGSGKSELAFSFLTEAERCGLPAALIADDQIFVYRDGETIIAERPEAIAGLLELR GSGIVSVKSVPSGVLHFAVTTVLSPENPRLPEDDEALLMPCGGHLRLLRIPLSSLVPYGKFAALAQNLFKTNVK
Sequences:
>Translated_154_residues MNAERFNLHATAIVVDGTGILFTGPSGSGKSELAFSFLTEAERCGLPAALIADDQIFVYRDGETIIAERPEAIAGLLELR GSGIVSVKSVPSGVLHFAVTTVLSPENPRLPEDDEALLMPCGGHLRLLRIPLSSLVPYGKFAALAQNLFKTNVK >Mature_154_residues MNAERFNLHATAIVVDGTGILFTGPSGSGKSELAFSFLTEAERCGLPAALIADDQIFVYRDGETIIAERPEAIAGLLELR GSGIVSVKSVPSGVLHFAVTTVLSPENPRLPEDDEALLMPCGGHLRLLRIPLSSLVPYGKFAALAQNLFKTNVK
Specific function: Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-pr
COG id: COG1493
COG function: function code T; Serine kinase of the HPr protein, regulates carbohydrate metabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPrK/P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003755 - InterPro: IPR011104 - InterPro: IPR011126 [H]
Pfam domain/function: PF07475 Hpr_kinase_C; PF02603 Hpr_kinase_N [H]
EC number: NA
Molecular weight: Translated: 16389; Mature: 16389
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAERFNLHATAIVVDGTGILFTGPSGSGKSELAFSFLTEAERCGLPAALIADDQIFVYR CCCCEEEEEEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCEEEEEE DGETIIAERPEAIAGLLELRGSGIVSVKSVPSGVLHFAVTTVLSPENPRLPEDDEALLMP CCCEEEECCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHEECCCCCCCCCCCCEEEEE CGGHLRLLRIPLSSLVPYGKFAALAQNLFKTNVK CCCCEEEEEECHHHCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNAERFNLHATAIVVDGTGILFTGPSGSGKSELAFSFLTEAERCGLPAALIADDQIFVYR CCCCEEEEEEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCEEEEEE DGETIIAERPEAIAGLLELRGSGIVSVKSVPSGVLHFAVTTVLSPENPRLPEDDEALLMP CCCEEEECCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHEECCCCCCCCCCCCEEEEE CGGHLRLLRIPLSSLVPYGKFAALAQNLFKTNVK CCCCEEEEEECHHHCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA