Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is yitJ [H]
Identifier: 57652617
GI number: 57652617
Start: 434214
End: 436055
Strand: Reverse
Name: yitJ [H]
Synonym: SACOL0429
Alternate gene names: 57652617
Gene position: 436055-434214 (Counterclockwise)
Preceding gene: 57652618
Following gene: 57652616
Centisome position: 15.52
GC content: 36.1
Gene sequence:
>1842_bases ATGAGTCAATTCCTCACACAATTGAAAGATAATGTTTTAGTAGCTGATGGCGCTATAGGAACCATTTTATACTCTGAAGG ATTAGACACCTGTCCAGAAGCATATAATCTTAGCCATCCAGATAAAGTTGAACGCATCCATCGTTCATATATTGAAGCCG GTGCTGATGTCATTCAAACCAATACTTATGGTGCAAATTTTGAAAAGTTAAAACGATTCGGTCTTGAAGATAAAGTTAAA GCAATACATCAAGCCGCCGTTCGCATCGCAAAAAAAGCAGCAAATAAAGATACGTATATATTAGGCACAGTTGGTGGGTT TAGAGGTATCAAACAAGAGGATATCAGCTTACAAACTATTCTTTATCATACTGAAATTCAAATAGACACCTTAATTGAAG AAGGCGTTGACGCGCTACTTTTCGAAACGTATTACGACCTAGAAGAGTTAACAAATGTCATTTCACGAACGAGAAAGAAA TACGACATTCCAATCATTGCTCAATTAACCGCTTCAAACACAAATTACTTAGTTAATGGTCAGGCAATCAATGAAGGATT AAAACAACTCGTTCAATGTGGTGCAAACATCGTGGGACTCAATTGTCATCATGGCCCGCACCATATGCAAGAGTCTTTCA CACATATTGAATTACCAGAGCACGCATTCTTATCTTGTTATCCAAATGCCAGCTTATTAGATATTGAAAATAGTGAATTT AAGTATAGTGACAATGCACAATATTTCGGTCAAGTTGCTCAAAATCTAATTCGCGAAGGTGTTCGTTTAATTGGTGGTTG CTGTGGTACAACGCCAGAGCACATCAAATTTATTAAAGAATCTATTCAGACACTTAAACCTGTTAATGACAAAAAAGTGA TTCCGATACCAACGAAAGCACTTTTCAATCCATCTCAAAATAAAGTTAGACAATCATTAACATCTAAGGTTCAAGAACGT CCAACCGTTATTATCGAATTGGATACACCGAAACATTTAGACACGGATAGATTTTTTGAAAATATCGCTAAACTTGATAA AGCTAATGTAGATGCGGTAACACTCGCAGATAATTCATTGGCAACTGTCAGAATTAGCAATATTGCTGCTGCTAGCTTAA TTAAGCAATATTACAATATTGAACCACTCGTACATATTACATGTCGAGACCGAAACTTAATCGGCTTGCAGTCCCATTTA CTTGGATTATCGCTCATTGGCGTTAACGAAATATTAGCCATAACTGGTGATCCTTCAAAAGTTGGTCACTTACCAGGTGC AACCAATGTCTATGATGTTAATTCTAAAGGATTAACTGAACTCGCTCTAAGATTTAATCAAGGTATTAACACTGACGGTG ATGCGCTGAAGAAACGTACACACTTCAACATCGCTGGCGCCTTTAACCCTAATGTTCGTAAATTATATGGTGCCGTCAAA AGATTAGAGAAAAAGATAGAAAGCGGAATGTCTTATTTTATAACACAACCCGTGTACAGCAAAGAGAAAATCATTGAAAT TTACCATGCCACTAAGCACTTGAACAAACCATTTTTCATAGGCATTATGCCTATCGCAAGTTACAAAAACGCACTCTTTT TGCATAATGAAGTGCCAGGAATCAAGATGTCAGATGAAATTTTACAACAATTTGAAGCAGTTAAAGATGATAAAGCCAAA ACACGAGAACTAAGTCTTAAGCTTTCAAAGGATTTAATCGATACTGTTCATGAATATTTTAATGGTTTATACATTATCAC ACCGTTTCAAAATGTCGAAGATTCATTAGAACTTGCAGCATACTCAAAATCTATTACTGCTCACAAGGAGGCAATATTAT GA
Upstream 100 bases:
>100_bases GAACGTGGTATCACTTTCGGTCTATTCCGATTAAGTGTTGGTCTCGAAGATCCTGATGAACTCATTGCAGACATCAAATA CGCATTAAAGGAGGCATTCA
Downstream 100 bases:
>100_bases CAACAATTAAAACATCAAACTTAGGATTCCCAAGATTAGGTAGAAAAAGAGAATGGAAAAAAGCCATCGAAAGTTATTGG GCAAAGAAGATTTCTAAAGA
Product: bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein
Products: NA
Alternate protein names: Homocysteine S-methyltransferase; S-methylmethionine:homocysteine methyltransferase; 5,10-methylenetetrahydrofolate reductase [H]
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MSQFLTQLKDNVLVADGAIGTILYSEGLDTCPEAYNLSHPDKVERIHRSYIEAGADVIQTNTYGANFEKLKRFGLEDKVK AIHQAAVRIAKKAANKDTYILGTVGGFRGIKQEDISLQTILYHTEIQIDTLIEEGVDALLFETYYDLEELTNVISRTRKK YDIPIIAQLTASNTNYLVNGQAINEGLKQLVQCGANIVGLNCHHGPHHMQESFTHIELPEHAFLSCYPNASLLDIENSEF KYSDNAQYFGQVAQNLIREGVRLIGGCCGTTPEHIKFIKESIQTLKPVNDKKVIPIPTKALFNPSQNKVRQSLTSKVQER PTVIIELDTPKHLDTDRFFENIAKLDKANVDAVTLADNSLATVRISNIAAASLIKQYYNIEPLVHITCRDRNLIGLQSHL LGLSLIGVNEILAITGDPSKVGHLPGATNVYDVNSKGLTELALRFNQGINTDGDALKKRTHFNIAGAFNPNVRKLYGAVK RLEKKIESGMSYFITQPVYSKEKIIEIYHATKHLNKPFFIGIMPIASYKNALFLHNEVPGIKMSDEILQQFEAVKDDKAK TRELSLKLSKDLIDTVHEYFNGLYIITPFQNVEDSLELAAYSKSITAHKEAIL
Sequences:
>Translated_613_residues MSQFLTQLKDNVLVADGAIGTILYSEGLDTCPEAYNLSHPDKVERIHRSYIEAGADVIQTNTYGANFEKLKRFGLEDKVK AIHQAAVRIAKKAANKDTYILGTVGGFRGIKQEDISLQTILYHTEIQIDTLIEEGVDALLFETYYDLEELTNVISRTRKK YDIPIIAQLTASNTNYLVNGQAINEGLKQLVQCGANIVGLNCHHGPHHMQESFTHIELPEHAFLSCYPNASLLDIENSEF KYSDNAQYFGQVAQNLIREGVRLIGGCCGTTPEHIKFIKESIQTLKPVNDKKVIPIPTKALFNPSQNKVRQSLTSKVQER PTVIIELDTPKHLDTDRFFENIAKLDKANVDAVTLADNSLATVRISNIAAASLIKQYYNIEPLVHITCRDRNLIGLQSHL LGLSLIGVNEILAITGDPSKVGHLPGATNVYDVNSKGLTELALRFNQGINTDGDALKKRTHFNIAGAFNPNVRKLYGAVK RLEKKIESGMSYFITQPVYSKEKIIEIYHATKHLNKPFFIGIMPIASYKNALFLHNEVPGIKMSDEILQQFEAVKDDKAK TRELSLKLSKDLIDTVHEYFNGLYIITPFQNVEDSLELAAYSKSITAHKEAIL >Mature_612_residues SQFLTQLKDNVLVADGAIGTILYSEGLDTCPEAYNLSHPDKVERIHRSYIEAGADVIQTNTYGANFEKLKRFGLEDKVKA IHQAAVRIAKKAANKDTYILGTVGGFRGIKQEDISLQTILYHTEIQIDTLIEEGVDALLFETYYDLEELTNVISRTRKKY DIPIIAQLTASNTNYLVNGQAINEGLKQLVQCGANIVGLNCHHGPHHMQESFTHIELPEHAFLSCYPNASLLDIENSEFK YSDNAQYFGQVAQNLIREGVRLIGGCCGTTPEHIKFIKESIQTLKPVNDKKVIPIPTKALFNPSQNKVRQSLTSKVQERP TVIIELDTPKHLDTDRFFENIAKLDKANVDAVTLADNSLATVRISNIAAASLIKQYYNIEPLVHITCRDRNLIGLQSHLL GLSLIGVNEILAITGDPSKVGHLPGATNVYDVNSKGLTELALRFNQGINTDGDALKKRTHFNIAGAFNPNVRKLYGAVKR LEKKIESGMSYFITQPVYSKEKIIEIYHATKHLNKPFFIGIMPIASYKNALFLHNEVPGIKMSDEILQQFEAVKDDKAKT RELSLKLSKDLIDTVHEYFNGLYIITPFQNVEDSLELAAYSKSITAHKEAIL
Specific function: Terminal step in the de novo biosynthesis of methionine. [C]
COG id: COG0685
COG function: function code E; 5,10-methylenetetrahydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Hcy-binding domain [H]
Homologues:
Organism=Homo sapiens, GI169790923, Length=323, Percent_Identity=26.625386996904, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI157266337, Length=331, Percent_Identity=26.5861027190332, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI13162290, Length=311, Percent_Identity=26.6881028938907, Blast_Score=83, Evalue=1e-15, Organism=Escherichia coli, GI1790450, Length=430, Percent_Identity=24.6511627906977, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1786456, Length=309, Percent_Identity=25.5663430420712, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17535405, Length=321, Percent_Identity=25.5451713395639, Blast_Score=112, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6324982, Length=323, Percent_Identity=22.6006191950464, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: 513 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1320 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003171 - InterPro: IPR003726 [H]
Pfam domain/function: PF02219 MTHFR; PF02574 S-methyl_trans [H]
EC number: =2.1.1.10; =1.5.1.20 [H]
Molecular weight: Translated: 68479; Mature: 68348
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS50970 HCY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFLTQLKDNVLVADGAIGTILYSEGLDTCPEAYNLSHPDKVERIHRSYIEAGADVIQT CCHHHHHHCCCEEEECCCCEEEEECCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCEEEC NTYGANFEKLKRFGLEDKVKAIHQAAVRIAKKAANKDTYILGTVGGFRGIKQEDISLQTI CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEE LYHTEIQIDTLIEEGVDALLFETYYDLEELTNVISRTRKKYDIPIIAQLTASNTNYLVNG EEEEEEHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEC QAINEGLKQLVQCGANIVGLNCHHGPHHMQESFTHIELPEHAFLSCYPNASLLDIENSEF HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCEEECCCCCEEEECCCCEEEECCCCCC KYSDNAQYFGQVAQNLIREGVRLIGGCCGTTPEHIKFIKESIQTLKPVNDKKVIPIPTKA EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHH LFNPSQNKVRQSLTSKVQERPTVIIELDTPKHLDTDRFFENIAKLDKANVDAVTLADNSL HCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCE ATVRISNIAAASLIKQYYNIEPLVHITCRDRNLIGLQSHLLGLSLIGVNEILAITGDPSK EEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHEEEECCCEEEEEECCCHH VGHLPGATNVYDVNSKGLTELALRFNQGINTDGDALKKRTHFNIAGAFNPNVRKLYGAVK CCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHH RLEKKIESGMSYFITQPVYSKEKIIEIYHATKHLNKPFFIGIMPIASYKNALFLHNEVPG HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCEEEEECCCCC IKMSDEILQQFEAVKDDKAKTRELSLKLSKDLIDTVHEYFNGLYIITPFQNVEDSLELAA CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHH YSKSITAHKEAIL HHHHHHHHHHHCC >Mature Secondary Structure SQFLTQLKDNVLVADGAIGTILYSEGLDTCPEAYNLSHPDKVERIHRSYIEAGADVIQT CHHHHHHCCCEEEECCCCEEEEECCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCEEEC NTYGANFEKLKRFGLEDKVKAIHQAAVRIAKKAANKDTYILGTVGGFRGIKQEDISLQTI CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEE LYHTEIQIDTLIEEGVDALLFETYYDLEELTNVISRTRKKYDIPIIAQLTASNTNYLVNG EEEEEEHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEC QAINEGLKQLVQCGANIVGLNCHHGPHHMQESFTHIELPEHAFLSCYPNASLLDIENSEF HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCEEECCCCCEEEECCCCEEEECCCCCC KYSDNAQYFGQVAQNLIREGVRLIGGCCGTTPEHIKFIKESIQTLKPVNDKKVIPIPTKA EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHH LFNPSQNKVRQSLTSKVQERPTVIIELDTPKHLDTDRFFENIAKLDKANVDAVTLADNSL HCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCE ATVRISNIAAASLIKQYYNIEPLVHITCRDRNLIGLQSHLLGLSLIGVNEILAITGDPSK EEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHEEEECCCEEEEEECCCHH VGHLPGATNVYDVNSKGLTELALRFNQGINTDGDALKKRTHFNIAGAFNPNVRKLYGAVK CCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHH RLEKKIESGMSYFITQPVYSKEKIIEIYHATKHLNKPFFIGIMPIASYKNALFLHNEVPG HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCEEEEECCCCC IKMSDEILQQFEAVKDDKAKTRELSLKLSKDLIDTVHEYFNGLYIITPFQNVEDSLELAA CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHH YSKSITAHKEAIL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]