Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is flgJ [C]
Identifier: 57652384
GI number: 57652384
Start: 2732445
End: 2734304
Strand: Direct
Name: flgJ [C]
Synonym: SACOL2666
Alternate gene names: 57652384
Gene position: 2732445-2734304 (Clockwise)
Preceding gene: 57652382
Following gene: 57652397
Centisome position: 97.26
GC content: 32.69
Gene sequence:
>1860_bases ATGCCTAAAAATAAAATTTTAATTTATTTGCTATCAACTACGCTCGTATTACCTACTTTAGTTTCACCTACCGCTTATGC TGATACACCTCAAAAAGATACTACAGCTAAGACAACATCTCATGATTCAAAAAAATCTAATGACGATGAAACTTCTAAGG ATACTACAAGTAAAGATATTGATAAAGCAGACAAAAATAATACAAGTAACCAAGACAATAACGACAAAAAATTTAAAACT ATAGACGACAGCACTTCAGACTCTAACAATATCATTGATTTTATTTATAAGAATTTACCACAAACCAATATAAACCAATT GCTAACCAAAAATAAATACGATGATAATTACTCATTAACAACTTTAATCCAAAACTTATTCAATTTAAATTCGGATATTT CTGATTACGAACAACCTCGTAATGGCGAAAAGTCAACAAATGATTCGAATAAAAACAGTGACAATAGCATCAAAAATGAC ACTGATACGCAATCATCTAAACAAGATAAAGCAGACAATCAAAAAGCACCTAAATCAAACAATACAAAACCAAGTACATC TAATAAGCAACCAAATTCGCCAAAGCCAACACAACCTAATCAATCAAATAGTCAACCAGCAAGTGACGATAAAGCAAATC AAAAATCTTCATCGAAAGATAATCAATCAATGTCAGATTCGGCTTTAGACTCTATTTTGGATCAATACAGTGAAGATGCA AAGAAAACACAAAAAGATTATGCATCTCAATCTAAAAAAGACAAAAATGAAAAATCTAATACAAAGAATCCACAGTTACC AACACAAGATGAATTGAAACATAAATCTAAACCTGCTCAATCATTCAATAACGATGTTAATCAAAAGGATACACGTGCAA CATCATTATTCGAAACAGATCCTAGTATATCTAACAATGATGATAGCGGACAATTTAACGTTGTTGACTCAAAAGATACA CGTCAATTTGTCAAATCAATTGCTAAAGATGCACATCGCATTGGTCAAGATAACGATATTTATGCGTCTGTCATGATTGC CCAAGCAATCTTAGAATCTGACTCAGGTCGTAGTGCTTTAGCTAAGTCACCAAACCATAATTTATTCGGTATCAAAGGTG CTTTTGAAGGGAATTCTGTTCCTTTTAACACATTAGAAGCTGATGGTAATCAATTGTATAGTATTAATGCTGGATTCCGA AAATATCCAAGCACGAAAGAATCACTAAAAGATTACTCTGACCTTATTAAAAATGGTATTGATGGCAATCGAACAATTTA TAAACCAACATGGAAATCGGAAGCCGATTCTTATAAAGATGCAACATCACACTTATCTAAAACATATGCTACAGATCCAA ACTATGCTAAGAAATTAAACAGTATTATTAAACACTATCAATTAACTCAGTTTGACGATGAACGCATGCCAGATTTAGAT AAATATGAACGTTCTATCAAGGATTATGATGATTCATCAGATGAATTCAAACCTTTCCGTGAGGTATCTGATAGTATGCC ATATCCACATGGCCAATGTACTTGGTACGTATATAACCGTATGAAACAATTTGGTACATCTATCTCAGGTGATTTAGGTG ATGCACATAATTGGAATAATCGAGCTCAATACCGTGATTATCAAGTAAGTCATACACCAAAACGTCATGCTGCTGTTGTA TTTGAGGCTGGACAATTTGGTGCAGATCAACATTACGGTCATGTAGCATTTGTTGAAAAAGTTAACAGTGATGGTTCTAT CGTTATTTCAGAATCCAATGTTAAAGGATTAGGTATCATTTCTCATAGAACTATCAACGCAGCTGCCGCTGAAGAATTAT CATATATTACAGGTAAATAA
Upstream 100 bases:
>100_bases ATTGATACCTATCAACTATTTTCAGCATACGATAAATTATAACAAATCATAGTTTATTATCACACTTAATTATTATATTT TTCAAGGGAGAATACGAAAT
Downstream 100 bases:
>100_bases GTATTATATTAAACCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCCGATT TCTTATTCAATTAAACCCGA
Product: N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: 1,4-beta-N-acetylmuramoylhydrolase; Lysozyme; Peptidoglycan hydrolase; Pg-hydrolase 2 [H]
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MPKNKILIYLLSTTLVLPTLVSPTAYADTPQKDTTAKTTSHDSKKSNDDETSKDTTSKDIDKADKNNTSNQDNNDKKFKT IDDSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKND TDTQSSKQDKADNQKAPKSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDA KKTQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKSKPAQSFNNDVNQKDTRATSLFETDPSISNNDDSGQFNVVDSKDT RQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKSPNHNLFGIKGAFEGNSVPFNTLEADGNQLYSINAGFR KYPSTKESLKDYSDLIKNGIDGNRTIYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLNSIIKHYQLTQFDDERMPDLD KYERSIKDYDDSSDEFKPFREVSDSMPYPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQYRDYQVSHTPKRHAAVV FEAGQFGADQHYGHVAFVEKVNSDGSIVISESNVKGLGIISHRTINAAAAEELSYITGK
Sequences:
>Translated_619_residues MPKNKILIYLLSTTLVLPTLVSPTAYADTPQKDTTAKTTSHDSKKSNDDETSKDTTSKDIDKADKNNTSNQDNNDKKFKT IDDSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKND TDTQSSKQDKADNQKAPKSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDA KKTQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKSKPAQSFNNDVNQKDTRATSLFETDPSISNNDDSGQFNVVDSKDT RQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKSPNHNLFGIKGAFEGNSVPFNTLEADGNQLYSINAGFR KYPSTKESLKDYSDLIKNGIDGNRTIYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLNSIIKHYQLTQFDDERMPDLD KYERSIKDYDDSSDEFKPFREVSDSMPYPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQYRDYQVSHTPKRHAAVV FEAGQFGADQHYGHVAFVEKVNSDGSIVISESNVKGLGIISHRTINAAAAEELSYITGK >Mature_618_residues PKNKILIYLLSTTLVLPTLVSPTAYADTPQKDTTAKTTSHDSKKSNDDETSKDTTSKDIDKADKNNTSNQDNNDKKFKTI DDSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKNDT DTQSSKQDKADNQKAPKSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDAK KTQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKSKPAQSFNNDVNQKDTRATSLFETDPSISNNDDSGQFNVVDSKDTR QFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKSPNHNLFGIKGAFEGNSVPFNTLEADGNQLYSINAGFRK YPSTKESLKDYSDLIKNGIDGNRTIYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLNSIIKHYQLTQFDDERMPDLDK YERSIKDYDDSSDEFKPFREVSDSMPYPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQYRDYQVSHTPKRHAAVVF EAGQFGADQHYGHVAFVEKVNSDGSIVISESNVKGLGIISHRTINAAAAEELSYITGK
Specific function: May work in concert with and potentiate the processive hydrolytic action of muramidase-1, which requires binding of the enzyme to non-reducing ends of glycan chains. Hydrolysis in the midst of glycan chains would increase the number of binding sites for m
COG id: COG1705
COG function: function code NU; Muramidase (flagellum-specific)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 6 LysM repeats [H]
Homologues:
Organism=Escherichia coli, GI1787321, Length=152, Percent_Identity=28.9473684210526, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013338 - InterPro: IPR002901 - InterPro: IPR018392 - InterPro: IPR002482 [H]
Pfam domain/function: PF01832 Glucosaminidase; PF01476 LysM [H]
EC number: =3.2.1.17 [H]
Molecular weight: Translated: 69254; Mature: 69122
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKNKILIYLLSTTLVLPTLVSPTAYADTPQKDTTAKTTSHDSKKSNDDETSKDTTSKDI CCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH DKADKNNTSNQDNNDKKFKTIDDSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLT HHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHH TLIQNLFNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKNDTDTQSSKQDKADNQKAPKSN HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC NTKPSTSNKQPNSPKPTQPNQSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH KKTQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKSKPAQSFNNDVNQKDTRATSLFETD HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHEECC PSISNNDDSGQFNVVDSKDTRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSAL CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHH AKSPNHNLFGIKGAFEGNSVPFNTLEADGNQLYSINAGFRKYPSTKESLKDYSDLIKNGI HCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEECCCHHHCCCHHHHHHHHHHHHHCCC DGNRTIYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLNSIIKHYQLTQFDDERMPDLD CCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHH KYERSIKDYDDSSDEFKPFREVSDSMPYPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNN HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCC RAQYRDYQVSHTPKRHAAVVFEAGQFGADQHYGHVAFVEKVNSDGSIVISESNVKGLGII CCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEE SHRTINAAAAEELSYITGK ECCCCCHHHHHHHHHHCCC >Mature Secondary Structure PKNKILIYLLSTTLVLPTLVSPTAYADTPQKDTTAKTTSHDSKKSNDDETSKDTTSKDI CCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH DKADKNNTSNQDNNDKKFKTIDDSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLT HHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHH TLIQNLFNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKNDTDTQSSKQDKADNQKAPKSN HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC NTKPSTSNKQPNSPKPTQPNQSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH KKTQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKSKPAQSFNNDVNQKDTRATSLFETD HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHEECC PSISNNDDSGQFNVVDSKDTRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSAL CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHH AKSPNHNLFGIKGAFEGNSVPFNTLEADGNQLYSINAGFRKYPSTKESLKDYSDLIKNGI HCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEECCCHHHCCCHHHHHHHHHHHHHCCC DGNRTIYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLNSIIKHYQLTQFDDERMPDLD CCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHH KYERSIKDYDDSSDEFKPFREVSDSMPYPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNN HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCC RAQYRDYQVSHTPKRHAAVVFEAGQFGADQHYGHVAFVEKVNSDGSIVISESNVKGLGII CCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEE SHRTINAAAAEELSYITGK ECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1347040; 2753858 [H]