Click here to switch to the map view.

The map label for this gene is atpC

Identifier: 57652124

GI number: 57652124

Start: 2156715

End: 2157119

Strand: Reverse

Name: atpC

Synonym: SACOL2094

Alternate gene names: 57652124

Gene position: 2157119-2156715 (Counterclockwise)

Preceding gene: 57652125

Following gene: 57650774

Centisome position: 76.78

GC content: 36.54

Gene sequence:

>405_bases
ATGAATACATTAAACCTAGATATTGTCACTCCTAATGGTTCTGTTTACAATCGTGATAATGTTGAACTCGTTGTTATGCA
AACAACAGCTGGTGAGATAGGTGTCATGAGTGGACATATTCCAACTGTAGCTGCTTTAAAAACAGGCTTTGTAAAAGTGA
AATTTCACGATGGAACTGAATATATTGCTGTAAGCGATGGCTTTGTTGAAGTTAGAAAAGATAAAGTTTCAATCATTGTT
CAGACTGCAGAAACTGCAAGAGAAATTGATGTTGAAAGAGCTAAATTAGCCAAAGCAAGAGCAGAGTCTCACTTGGAAAA
TGATGACGACAATACTGATATTCATAGAGCCGAAAGAGCTTTAGAGAGAGCAAATAACCGTTTGCGTGTGGCTGAATTAA
AATAG

Upstream 100 bases:

>100_bases
ATTCCAGAAGATGCATTCCGTTTAGTTGGTAGCATGGATGATGTTATTGCAAAAGCTAAAGATATGGGTGTTGAAGTATA
ACAATTAGGAGGAATGGATA

Downstream 100 bases:

>100_bases
TAAATAAAGGGTCGAAGATGTGATTTCATATCTTCGACCCTTTTTTGAATTATATTGATTTAAAGATACAAAACATGAGA
GGGGGGAAGGAATTGATAAA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDGTEYIAVSDGFVEVRKDKVSIIV
QTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERALERANNRLRVAELK

Sequences:

>Translated_134_residues
MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDGTEYIAVSDGFVEVRKDKVSIIV
QTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERALERANNRLRVAELK
>Mature_134_residues
MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDGTEYIAVSDGFVEVRKDKVSIIV
QTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERALERANNRLRVAELK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=132, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_STAA1 (A7X4U2)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442676.1
- ProteinModelPortal:   A7X4U2
- SMR:   A7X4U2
- STRING:   A7X4U2
- EnsemblBacteria:   EBSTAT00000003208
- GeneID:   5560414
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_2086
- eggNOG:   COG0355
- GeneTree:   EBGT00050000024330
- HOGENOM:   HBG663981
- OMA:   SAEASIF
- ProtClustDB:   PRK00571
- BioCyc:   SAUR418127:SAHV_2086-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14844; Mature: 14844

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDGTE
CCEEEEEEECCCCCEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCEEEEEEECCCE
YIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERA
EEEEECCEEEEECCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LERANNRLRVAELK
HHHCCCEEEEEEEC
>Mature Secondary Structure
MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDGTE
CCEEEEEEECCCCCEEECCCEEEEEEEECCCCEEEECCCCCEEEEEECCEEEEEEECCCE
YIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERA
EEEEECCEEEEECCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LERANNRLRVAELK
HHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA