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The map label for this gene is atpD [H]

Identifier: 57652125

GI number: 57652125

Start: 2157139

End: 2158551

Strand: Reverse

Name: atpD [H]

Synonym: SACOL2095

Alternate gene names: 57652125

Gene position: 2158551-2157139 (Counterclockwise)

Preceding gene: 57652126

Following gene: 57652124

Centisome position: 76.83

GC content: 38.64

Gene sequence:

>1413_bases
ATGGGAATTGGCCGTGTAACTCAAGTTATGGGTCCTGTAATTGATGTTCGATTTGAACATAACGAAGTTCCTAAAATTAA
TAACGCCTTGGTTATTGATGTGCCTAAAGAAGAAGGTACAATACAACTAACATTAGAAGTTGCGCTGCAATTAGGTGACG
ACGTTGTTCGTACAATTGCGATGGATTCAACTGATGGTGTCCAAAGAGGCATGGATGTAAAAGATACAGGCAAAGAAATT
AGTGTACCTGTTGGTGACGAAACATTAGGTCGTGTATTTAATGTACTAGGTGAAACAATTGACCTTAAAGAAGAAATTAG
TGATTCTGTTCGCCGCGATCCTATCCATCGTCAAGCACCAGCATTCGATGAACTTTCAACAGAAGTTCAAATTTTAGAAA
CAGGTATTAAAGTAGTAGATTTACTAGCACCTTATATTAAAGGTGGTAAAATCGGATTGTTCGGTGGTGCCGGTGTAGGT
AAAACAGTATTAATCCAAGAATTAATTAACAACATCGCTCAAGAGCACGGTGGTATTTCTGTATTCGCCGGTGTAGGTGA
ACGTACTCGTGAAGGTAACGATTTATACTTCGAAATGAGTGACAGTGGTGTAATTAAGAAAACAGCCATGGTATTCGGGC
AAATGAATGAGCCACCTGGTGCACGTATGCGTGTTGCATTATCTGGTTTAACAATGGCTGAATATTTCCGTGACGAACAA
GGTCAAGACGTATTATTATTCATCGATAACATTTTCAGATTTACACAAGCTGGTTCTGAGGTATCTGCATTATTAGGTCG
TATGCCTTCTGCAGTAGGTTACCAACCAACACTTGCTACTGAAATGGGACAATTACAAGAACGTATTACGTCTACAACAA
AAGGATCAGTTACTTCTATTCAAGCGGTATTCGTACCTGCCGATGACTATACTGACCCAGCGCCTGCGACAGCGTTTGCC
CATTTAGATGCAACTACAAACTTAGAACGTAAATTAACTGAAATGGGTATTTATCCAGCCGTGGATCCATTAGCGTCTAC
ATCAAGAGCATTGGAACCATCAATTGTAGGTCAAGAACATTATGAAGTAGCTCGTGATGTACAATCAACACTTCAAAAAT
ACCGTGAATTACAAGATATCATTGCTATCTTAGGTATGGACGAATTATCTGATGAAGATAAACAAACAGTTGAACGCGCA
CGTAGAATTCAATTCTTCTTATCTCAAAACTTCCACGTAGCGGAACAATTTACTGGTCAAAAAGGTTCTTATGTACCTGT
TAAGACAACAGTTGCAAACTTTAAAGATATCTTAGATGGTAAATATGACCATATTCCAGAAGATGCATTCCGTTTAGTTG
GTAGCATGGATGATGTTATTGCAAAAGCTAAAGATATGGGTGTTGAAGTATAA

Upstream 100 bases:

>100_bases
AGAATATAACAGAGCGAGACAAGCAGAAATTACGCAACAAATTACTGAAATTGTTGGTGGTTCCGCAGCGCTTGAATAAT
ATTTAAAGGAGGAAAATAGC

Downstream 100 bases:

>100_bases
CAATTAGGAGGAATGGATAATGAATACATTAAACCTAGATATTGTCACTCCTAATGGTTCTGTTTACAATCGTGATAATG
TTGAACTCGTTGTTATGCAA

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MGIGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEI
SVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVG
KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQ
GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTTKGSVTSIQAVFVPADDYTDPAPATAFA
HLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILGMDELSDEDKQTVERA
RRIQFFLSQNFHVAEQFTGQKGSYVPVKTTVANFKDILDGKYDHIPEDAFRLVGSMDDVIAKAKDMGVEV

Sequences:

>Translated_470_residues
MGIGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEI
SVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVG
KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQ
GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTTKGSVTSIQAVFVPADDYTDPAPATAFA
HLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILGMDELSDEDKQTVERA
RRIQFFLSQNFHVAEQFTGQKGSYVPVKTTVANFKDILDGKYDHIPEDAFRLVGSMDDVIAKAKDMGVEV
>Mature_469_residues
GIGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEIS
VPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGK
TVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQG
QDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTTKGSVTSIQAVFVPADDYTDPAPATAFAH
LDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILGMDELSDEDKQTVERAR
RIQFFLSQNFHVAEQFTGQKGSYVPVKTTVANFKDILDGKYDHIPEDAFRLVGSMDDVIAKAKDMGVEV

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=472, Percent_Identity=66.5254237288136, Blast_Score=617, Evalue=1e-177,
Organism=Homo sapiens, GI19913424, Length=325, Percent_Identity=28.6153846153846, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI50345984, Length=374, Percent_Identity=27.5401069518717, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI4757810, Length=374, Percent_Identity=27.5401069518717, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI19913428, Length=429, Percent_Identity=23.5431235431235, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI19913426, Length=371, Percent_Identity=23.4501347708895, Blast_Score=100, Evalue=5e-21,
Organism=Escherichia coli, GI1790170, Length=466, Percent_Identity=64.5922746781116, Blast_Score=612, Evalue=1e-176,
Organism=Escherichia coli, GI1788251, Length=320, Percent_Identity=30, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1790172, Length=430, Percent_Identity=26.9767441860465, Blast_Score=115, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI25144756, Length=469, Percent_Identity=64.6055437100213, Blast_Score=604, Evalue=1e-173,
Organism=Caenorhabditis elegans, GI17565854, Length=358, Percent_Identity=29.0502793296089, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI71988080, Length=378, Percent_Identity=27.2486772486773, Blast_Score=105, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71988063, Length=378, Percent_Identity=27.2486772486773, Blast_Score=104, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17510931, Length=413, Percent_Identity=24.2130750605327, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17570191, Length=420, Percent_Identity=22.8571428571429, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71988074, Length=377, Percent_Identity=25.4641909814324, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322581, Length=462, Percent_Identity=69.6969696969697, Blast_Score=637, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=428, Percent_Identity=24.2990654205607, Blast_Score=110, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6319370, Length=378, Percent_Identity=28.3068783068783, Blast_Score=100, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6320016, Length=234, Percent_Identity=29.4871794871795, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24638766, Length=472, Percent_Identity=65.8898305084746, Blast_Score=612, Evalue=1e-175,
Organism=Drosophila melanogaster, GI28574560, Length=470, Percent_Identity=64.468085106383, Blast_Score=587, Evalue=1e-168,
Organism=Drosophila melanogaster, GI20129479, Length=347, Percent_Identity=27.9538904899135, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24583988, Length=348, Percent_Identity=28.1609195402299, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24583986, Length=348, Percent_Identity=28.1609195402299, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24583984, Length=348, Percent_Identity=28.1609195402299, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24583992, Length=327, Percent_Identity=28.1345565749235, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24658560, Length=378, Percent_Identity=28.5714285714286, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI281361666, Length=439, Percent_Identity=24.1457858769932, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24646341, Length=439, Percent_Identity=24.1457858769932, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI17136796, Length=439, Percent_Identity=24.1457858769932, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24638768, Length=95, Percent_Identity=50.5263157894737, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 51401; Mature: 51270

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIA
CCCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHCHHHHHHHH
MDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAP
CCCCHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
AFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGIS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEE
VFAGVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQ
EEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCC
GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTTKGSVTSI
CCEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
QAVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEH
EEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHH
YEVARDVQSTLQKYRELQDIIAILGMDELSDEDKQTVERARRIQFFLSQNFHVAEQFTGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
KGSYVPVKTTVANFKDILDGKYDHIPEDAFRLVGSMDDVIAKAKDMGVEV
CCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GIGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIA
CCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHCHHHHHHHH
MDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAP
CCCCHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
AFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGIS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEE
VFAGVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQ
EEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCC
GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTTKGSVTSI
CCEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
QAVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEH
EEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHH
YEVARDVQSTLQKYRELQDIIAILGMDELSDEDKQTVERARRIQFFLSQNFHVAEQFTGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
KGSYVPVKTTVANFKDILDGKYDHIPEDAFRLVGSMDDVIAKAKDMGVEV
CCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA