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The map label for this gene is apl [H]

Identifier: 57651020

GI number: 57651020

Start: 2583382

End: 2583993

Strand: Direct

Name: apl [H]

Synonym: SACOL2522

Alternate gene names: 57651020

Gene position: 2583382-2583993 (Clockwise)

Preceding gene: 57651006

Following gene: 57651023

Centisome position: 91.95

GC content: 32.52

Gene sequence:

>612_bases
ATGGAACAAATTATCACTGAATTTATTAGCCGTTTTGGGTATGCAGCCATTTTTATATTAATTTTATTAGAAAATGTACT
ACCTATCGTACCATCGGAAATTATTCTGACATTTGCTGGTCTTATGTCTGTTAAATCACATTTATCAATTTTAACTTTAT
TTATTATTGCAACTATCGCATCGTTTATAGGGCTGTTAATTTTATATTATATCTGCCGTTTGATTTCAGAAGAACGTCTA
TATCGTTTTATTGATCGACACGGTAAGTGGATTAAATTGAAAAGTAAGGATTTAAAGCGAGCAAATGATTGGTTTAAAAA
GTATGGCGTATGGGCTGTATTTATCTGTCGTTTCATACCTGTATTACGTGTATTGATTACCATTCCAGCTGGTGTAAACC
GCATGAATGTTGTGACATTTACCGTTATTTCATTAATAGGTACTACAATCTGGAATTTCGGTTTAATTTTACTAGGACGC
ACTTTGAGCGATAGCTTTGGTATGTTGATGACTGGTCTTCATACATATTCACGTATTATGTATGTTGTCATCATTATCGC
AGTCATTTACTTTGCTATACGTTACATTGGCAAACGTAAGAGAGTAAAATAA

Upstream 100 bases:

>100_bases
TGTTTCAACATCGCATGCGACATCATTAATTATTCATTTGAATTTATCCAGTTTCTATTTGTCTGCAATTGCTGAAAATT
AAAGGAGCTTATTTTTAATA

Downstream 100 bases:

>100_bases
TATTGTTGTTAGCATAAAGGCATGAATTTTAAATTTCTATAAACAAAAAGCAGTGAATCATTCCATCTATTGAAATGATT
CACTGCTTTTTTAAGTTTAT

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSVKSHLSILTLFIIATIASFIGLLILYYICRLISEERL
YRFIDRHGKWIKLKSKDLKRANDWFKKYGVWAVFICRFIPVLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGR
TLSDSFGMLMTGLHTYSRIMYVVIIIAVIYFAIRYIGKRKRVK

Sequences:

>Translated_203_residues
MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSVKSHLSILTLFIIATIASFIGLLILYYICRLISEERL
YRFIDRHGKWIKLKSKDLKRANDWFKKYGVWAVFICRFIPVLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGR
TLSDSFGMLMTGLHTYSRIMYVVIIIAVIYFAIRYIGKRKRVK
>Mature_203_residues
MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSVKSHLSILTLFIIATIASFIGLLILYYICRLISEERL
YRFIDRHGKWIKLKSKDLKRANDWFKKYGVWAVFICRFIPVLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGR
TLSDSFGMLMTGLHTYSRIMYVVIIIAVIYFAIRYIGKRKRVK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23433; Mature: 23433

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSVKSHLSILTLFIIATIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFIGLLILYYICRLISEERLYRFIDRHGKWIKLKSKDLKRANDWFKKYGVWAVFICRFIP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGRTLSDSFGMLMTGLHTYSRIM
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVVIIIAVIYFAIRYIGKRKRVK
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSVKSHLSILTLFIIATIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFIGLLILYYICRLISEERLYRFIDRHGKWIKLKSKDLKRANDWFKKYGVWAVFICRFIP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGRTLSDSFGMLMTGLHTYSRIM
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVVIIIAVIYFAIRYIGKRKRVK
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]