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The map label for this gene is sarU [H]

Identifier: 57651006

GI number: 57651006

Start: 2563936

End: 2564679

Strand: Direct

Name: sarU [H]

Synonym: SACOL2507

Alternate gene names: 57651006

Gene position: 2563936-2564679 (Clockwise)

Preceding gene: 57651002

Following gene: 57651020

Centisome position: 91.26

GC content: 24.73

Gene sequence:

>744_bases
GTGGACTATCAAACTTTCGAAAAGGTCAATAAATTCATAAATGTAAAAGCGTACATATTTTTTCTCACTCAAGAGTTAAA
GCAACAATATAAATTATCATTAAAAGAATTGTTGATATTAGCATATTTTTATTACAAAAATGAACACAGTATTTCACTAA
AAGAAATCATTGGTGACATACTTTACAAACAATCTGATGTTGTAAAGAACATTAAGTCACTATCTAAAAAAGGATTTATA
AATAAGTCTAGAAACGAAGCAGATGAACGCCGTATTTTTGTTTCAGTTACTCCAATACAACGTAAAAAGATTGCTTGTGT
TATTAATGAGTTAGATAAAATAATTAAAGGATTTAATAAGGAAAGAGACTACATAAAATATCAATGGGCTCCAAAATATA
GCAAAGAATTTTTTATACTTTTTATGAACATTATGTACTCAAAAGATTTTTTAAAATATCGATTTAATTTAACATTTCTT
GATTTATCTATCTTATATGTAATATCATCTCGAAAAAATGAGATACTAAATTTAAAAGATTTGTTTGAAAGTATTAGATT
TATGTATCCTCAAATTGTTAGGTCAGTTAATAGATTAAATAATAAAGGTATGCTAATCAAAGAACGATCCCTTGCAGATG
AAAGGATTGTGTTAATCAAAATAAATAAAATACAATATAACACTATTAAAAGCATATTCACAGATACTTCCAAGATTCTC
AAACCAAGAAAATTTTTCTTTTAA

Upstream 100 bases:

>100_bases
AAAAATATTTAGGTTAACATGTCTTCAAAAGAGATTGCTTTTATATTACTTTAAATAATATAAAGTATTGGGACATCAGA
AAATAGTAGGAGAATGTAAG

Downstream 100 bases:

>100_bases
ATTTAAACAGATTTACCTCTTGATAAAATAAATAAGCAATCATACTACTTCTCAATTTAGTATAAATAAAAATACATAAT
TAACTTTCTTTTGTTTTTAT

Product: accessory regulator U

Products: NA

Alternate protein names: Staphylococcal accessory regulator U [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDYQTFEKVNKFINVKAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDILYKQSDVVKNIKSLSKKGFI
NKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNKERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFL
DLSILYVISSRKNEILNLKDLFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQYNTIKSIFTDTSKIL
KPRKFFF

Sequences:

>Translated_247_residues
MDYQTFEKVNKFINVKAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDILYKQSDVVKNIKSLSKKGFI
NKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNKERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFL
DLSILYVISSRKNEILNLKDLFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQYNTIKSIFTDTSKIL
KPRKFFF
>Mature_247_residues
MDYQTFEKVNKFINVKAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDILYKQSDVVKNIKSLSKKGFI
NKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNKERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFL
DLSILYVISSRKNEILNLKDLFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQYNTIKSIFTDTSKIL
KPRKFFF

Specific function: Positive regulator of RNAII and RNAIII in a cell density-dependent manner. It can contribute to the expression of virulence genes controlled by agr. May also regulate target genes via an agr-independent pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sarA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010166
- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29793; Mature: 29793

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYQTFEKVNKFINVKAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH
LYKQSDVVKNIKSLSKKGFINKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
ERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFLDLSILYVISSRKNEILNLKD
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHCCCCCEECHHH
LFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQYNTIKSIFTDTSKIL
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCEEHHHHHHHHHCHHHHC
KPRKFFF
CCHHCCC
>Mature Secondary Structure
MDYQTFEKVNKFINVKAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH
LYKQSDVVKNIKSLSKKGFINKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
ERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFLDLSILYVISSRKNEILNLKD
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHCCCCCEECHHH
LFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQYNTIKSIFTDTSKIL
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCEEHHHHHHHHHCHHHHC
KPRKFFF
CCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12496184 [H]