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The map label for this gene is nirR [H]

Identifier: 57650944

GI number: 57650944

Start: 2460981

End: 2461712

Strand: Reverse

Name: nirR [H]

Synonym: SACOL2399

Alternate gene names: 57650944

Gene position: 2461712-2460981 (Counterclockwise)

Preceding gene: 57650945

Following gene: 57650943

Centisome position: 87.62

GC content: 35.79

Gene sequence:

>732_bases
GTGAATGGGAATATCATTGTTGCACATGGCATGAGGCACGGACGACAGAATCAAGCGTTAGAAGCATTTATTTCTGAATT
AGTAAAAGATGATATACATCACTATGATATTGCGTTTTTAGAAAGTGAGCATCAGGATTTAGAGACGGTAATGACGACGT
TGATTCAAAGTGGGGTTGACCATTTTAAAATTGTACCATTGCTAATCTTTAGTGCAATGCATTATCTCAAGGATATACCG
AATATCGTTCATGAAATGAAACGACGGTATCCAGACATAAAGGTAGAAGTAAGCGAGCCACTTGGCACACATCCTTTAAT
GAGACGATTAATTGAACAACGTATTTGTGACGCATTAGCAGGTGACGAACAACAAGTTGGAGTTATGGTTGTTGCACACG
GCAATATTAATGGAAAGTTTACTAAGGCACACGAAGAGTTACAAATATGCGCTCAAAATTTGCAAATTAGCAAGCCGACA
TATGCGAGAACGCTATATGGAGAGATTAGTTTTACACATGATTTAGAAAGCATCTCGAAACGGTATCAAAAATTGATTGT
CGTACCATTATTTTTATATGACGGAAGACTTGTTAACAAAGTGAAGCAGCAAATGAATGACATGGTTATTAATACAGATA
TACACTTCACACCTTCAATTAACTTCGACCCAATTTTAAAGCAAATCATTAACGATAGATTAGAAAGCTTAATGATTCCA
ATGAAAATATAA

Upstream 100 bases:

>100_bases
TACAGGCATCAGGGAATTCCCTGATTTTACATTATAATGTGATTCTTTTCACAAAAACAAAATGATTTGGTATACAATAC
GTGTGAAAGGGTTGGTAAAT

Downstream 100 bases:

>100_bases
AAGCACTAACGAAAAATTAATACCTTTTTTTGAAATAAATATTATGGAGTAAAGGGGCATATTTTATGGCAAAGCAAAAA
CTAGTAATGATTGGTAACGG

Product: transcriptional regulator NirR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEHQDLETVMTTLIQSGVDHFKIVPLLIFSAMHYLKDIP
NIVHEMKRRYPDIKVEVSEPLGTHPLMRRLIEQRICDALAGDEQQVGVMVVAHGNINGKFTKAHEELQICAQNLQISKPT
YARTLYGEISFTHDLESISKRYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHFTPSINFDPILKQIINDRLESLMIP
MKI

Sequences:

>Translated_243_residues
MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEHQDLETVMTTLIQSGVDHFKIVPLLIFSAMHYLKDIP
NIVHEMKRRYPDIKVEVSEPLGTHPLMRRLIEQRICDALAGDEQQVGVMVVAHGNINGKFTKAHEELQICAQNLQISKPT
YARTLYGEISFTHDLESISKRYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHFTPSINFDPILKQIINDRLESLMIP
MKI
>Mature_243_residues
MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEHQDLETVMTTLIQSGVDHFKIVPLLIFSAMHYLKDIP
NIVHEMKRRYPDIKVEVSEPLGTHPLMRRLIEQRICDALAGDEQQVGVMVVAHGNINGKFTKAHEELQICAQNLQISKPT
YARTLYGEISFTHDLESISKRYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHFTPSINFDPILKQIINDRLESLMIP
MKI

Specific function: Chelates iron to the siroheme precursor [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. SirB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.4 [H]

Molecular weight: Translated: 27949; Mature: 27949

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEHQDLETVMTTLIQSGVD
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCH
HFKIVPLLIFSAMHYLKDIPNIVHEMKRRYPDIKVEVSEPLGTHPLMRRLIEQRICDALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC
GDEQQVGVMVVAHGNINGKFTKAHEELQICAQNLQISKPTYARTLYGEISFTHDLESISK
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHH
RYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHFTPSINFDPILKQIINDRLESLMIP
HHHHHHHHHHHHHCCHHHHHHHHHHHCEEEECCEEECCCCCCCHHHHHHHHHHHHHHCCC
MKI
CCC
>Mature Secondary Structure
MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEHQDLETVMTTLIQSGVD
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCH
HFKIVPLLIFSAMHYLKDIPNIVHEMKRRYPDIKVEVSEPLGTHPLMRRLIEQRICDALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC
GDEQQVGVMVVAHGNINGKFTKAHEELQICAQNLQISKPTYARTLYGEISFTHDLESISK
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHH
RYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHFTPSINFDPILKQIINDRLESLMIP
HHHHHHHHHHHHHCCHHHHHHHHHHHCEEEECCEEECCCCCCCHHHHHHHHHHHHHHCCC
MKI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA