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The map label for this gene is tnpA1 [H]

Identifier: 57650577

GI number: 57650577

Start: 1894859

End: 1895344

Strand: Reverse

Name: tnpA1 [H]

Synonym: SACOL1839

Alternate gene names: 57650577

Gene position: 1895344-1894859 (Counterclockwise)

Preceding gene: 57650578

Following gene: 57650575

Centisome position: 67.46

GC content: 29.42

Gene sequence:

>486_bases
ATGTCATCTGACACAAACAGTTTAGCACATACAAAATGGAATTGTAAGTATCATATTGTCTTTGCACCTAAATACAGAAG
ACAAGTGATATATGGAAAAATAAAAAAAGATATAGGGATTATATTGCGTCAATTATGTGAAAGAAAAGGTGTAGAGATAA
TTGAAGCAGAGGCATGTAAAGATCATATCCATATGTTAGTTAGTATACCACCCAAACTTGGGGTATCATCATTTGTTGGC
TATTTAAAAGGAAAAAGTAGTTTAATGATATTTGATAGACATGCTAACTTAAAGTATAGATATGGAAATAGAAAGTTTTG
GTGTAAAGGATTTTATGTGGATACAGTAGGTAGAAATAAAAAAGTGATTGAAAATTATATTCGTAATCAATTACAAGAGG
ATATCGTTGCAGACCAAATCTCAATGGAAGAATATTTAGATCCTTTCACTGGAGAGAAAAATAAAAAAAGAAAGAAAAAA
GAGTAA

Upstream 100 bases:

>100_bases
CAGAAAAGGTTCTACCATTGTCACAAAAAATGCATCTCTACGTGCTAGAATAAATATTGGTCAGCCAACCAAAATAATCA
ACACGAGGAGATGCTATTTA

Downstream 100 bases:

>100_bases
CCCTTTAGGGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTA
TAGCCGCAGAACAAACCACC

Product: IS200 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGIILRQLCERKGVEIIEAEACKDHIHMLVSIPPKLGVSSFVG
YLKGKSSLMIFDRHANLKYRYGNRKFWCKGFYVDTVGRNKKVIENYIRNQLQEDIVADQISMEEYLDPFTGEKNKKRKKK
E

Sequences:

>Translated_161_residues
MSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGIILRQLCERKGVEIIEAEACKDHIHMLVSIPPKLGVSSFVG
YLKGKSSLMIFDRHANLKYRYGNRKFWCKGFYVDTVGRNKKVIENYIRNQLQEDIVADQISMEEYLDPFTGEKNKKRKKK
E
>Mature_160_residues
SSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGIILRQLCERKGVEIIEAEACKDHIHMLVSIPPKLGVSSFVGY
LKGKSSLMIFDRHANLKYRYGNRKFWCKGFYVDTVGRNKKVIENYIRNQLQEDIVADQISMEEYLDPFTGEKNKKRKKKE

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 18906; Mature: 18775

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGIILRQLCERKGVEIIEAEACK
CCCCCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHH
DHIHMLVSIPPKLGVSSFVGYLKGKSSLMIFDRHANLKYRYGNRKFWCKGFYVDTVGRNK
HHHHEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEECCEEEEEEEEEEECCCCCH
KVIENYIRNQLQEDIVADQISMEEYLDPFTGEKNKKRKKKE
HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGIILRQLCERKGVEIIEAEACK
CCCCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHH
DHIHMLVSIPPKLGVSSFVGYLKGKSSLMIFDRHANLKYRYGNRKFWCKGFYVDTVGRNK
HHHHEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEECCEEEEEEEEEEECCCCCH
KVIENYIRNQLQEDIVADQISMEEYLDPFTGEKNKKRKKKE
HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]