Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is yddN [H]
Identifier: 57650505
GI number: 57650505
Start: 1708374
End: 1709387
Strand: Direct
Name: yddN [H]
Synonym: SACOL1678
Alternate gene names: 57650505
Gene position: 1708374-1709387 (Clockwise)
Preceding gene: 57651992
Following gene: 57650509
Centisome position: 60.81
GC content: 36.09
Gene sequence:
>1014_bases ATGGCGATTAAATATTCAGCATTAAACCTTGTCCCTATTCGAGAAGGTGAAGATGAACAAACAGCAATTAATGATATGGT TAATCTCGCACAACATTTAGACGAATTATCATATGAAAGATATTGGATTGCTGAACACCATAACGCTCCCAACCTAGTAA GTTCAGCAACTGCTTTATTAATTCAACATACGTTAGAACATACGAAACACATACGTGTAGGTTCTGGAGGCATCATGTTA CCTAATCATGCTCCATTAATCGTTGCGGAACAATTTGGCACGATGGCAACATTATTTCCAAATCGTGTCGATTTAGGATT AGGACGTGCACCTGGAACAGATATGATGACCGCAAGTGCATTAAGACGAGATCAACATGATGGTGTTTATAAATTTCCAG AAGAGGTTTCATTATTACAACAATATTTCGGCCCTGCTCACCAACAAGCATATGTTCGTGCTTATCCAGCAGTAGGTAAA AATGTGCCTTTATACATTCTTGGTTCTTCAACAGATTCTGCACATTTAGCTGCTCGCAAAGGGCTTCCATATGTGTTCGC TGGACATTTTGCACCTCAACAAATGAAAGAAGCTATCGAAATTTACAAAACGTTATTTGAACCTTCTGATGTATTAGACG AACCTTATGTTATTGTATGTTTAAATACAATCGTTGCTGAAAATGATGACGAAGCACAATATTTAGCTTCATCTATGGCA CAAGTAATGGTTAGTATCACTCGTGGCAGAATGCAGCCCGTTCAACCGCCAACACATGAACTACAAAATATATTAACGCC GAGAGAATACGCGATGGCTATGGAAAGACAGAAAATATCATTAATAGGTTCAGAAAATACTGTTCAACAAAAAATTCAAG ATTTTATGGAAACTTATGGTGAAGTCAACGAAATTATGGCAATAAGTTATATTTATGATAAAGATATGCAATTAGACTCT TATCGTCGGTTCAAGAATGTTATAAATCAGATAAATGAAAAAAACACTTTATAA
Upstream 100 bases:
>100_bases ATGTAACGTACTATTATTTTGGTTATGAGCAATTTAATATTTATCTGGTTATTCGATTGGTATACTTCTTATATCATAAA AAAGGAAGGACGATATAAAA
Downstream 100 bases:
>100_bases TGTGATAAATAAACTAAGTGAAAGTATGTATCCATAATATTAATAAAAATATACAGTAACAGCATTTTGAATGAAAGATG TCTTTATTGTTCAATCATTT
Product: luciferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MAIKYSALNLVPIREGEDEQTAINDMVNLAQHLDELSYERYWIAEHHNAPNLVSSATALLIQHTLEHTKHIRVGSGGIML PNHAPLIVAEQFGTMATLFPNRVDLGLGRAPGTDMMTASALRRDQHDGVYKFPEEVSLLQQYFGPAHQQAYVRAYPAVGK NVPLYILGSSTDSAHLAARKGLPYVFAGHFAPQQMKEAIEIYKTLFEPSDVLDEPYVIVCLNTIVAENDDEAQYLASSMA QVMVSITRGRMQPVQPPTHELQNILTPREYAMAMERQKISLIGSENTVQQKIQDFMETYGEVNEIMAISYIYDKDMQLDS YRRFKNVINQINEKNTL
Sequences:
>Translated_337_residues MAIKYSALNLVPIREGEDEQTAINDMVNLAQHLDELSYERYWIAEHHNAPNLVSSATALLIQHTLEHTKHIRVGSGGIML PNHAPLIVAEQFGTMATLFPNRVDLGLGRAPGTDMMTASALRRDQHDGVYKFPEEVSLLQQYFGPAHQQAYVRAYPAVGK NVPLYILGSSTDSAHLAARKGLPYVFAGHFAPQQMKEAIEIYKTLFEPSDVLDEPYVIVCLNTIVAENDDEAQYLASSMA QVMVSITRGRMQPVQPPTHELQNILTPREYAMAMERQKISLIGSENTVQQKIQDFMETYGEVNEIMAISYIYDKDMQLDS YRRFKNVINQINEKNTL >Mature_336_residues AIKYSALNLVPIREGEDEQTAINDMVNLAQHLDELSYERYWIAEHHNAPNLVSSATALLIQHTLEHTKHIRVGSGGIMLP NHAPLIVAEQFGTMATLFPNRVDLGLGRAPGTDMMTASALRRDQHDGVYKFPEEVSLLQQYFGPAHQQAYVRAYPAVGKN VPLYILGSSTDSAHLAARKGLPYVFAGHFAPQQMKEAIEIYKTLFEPSDVLDEPYVIVCLNTIVAENDDEAQYLASSMAQ VMVSITRGRMQPVQPPTHELQNILTPREYAMAMERQKISLIGSENTVQQKIQDFMETYGEVNEIMAISYIYDKDMQLDSY RRFKNVINQINEKNTL
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=319, Percent_Identity=39.8119122257053, Blast_Score=268, Evalue=4e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 37986; Mature: 37855
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKYSALNLVPIREGEDEQTAINDMVNLAQHLDELSYERYWIAEHHNAPNLVSSATALL CCEEEECEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH IQHTLEHTKHIRVGSGGIMLPNHAPLIVAEQFGTMATLFPNRVDLGLGRAPGTDMMTASA HHHHHHHHCEEEECCCCEECCCCCCEEEEHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHH LRRDQHDGVYKFPEEVSLLQQYFGPAHQQAYVRAYPAVGKNVPLYILGSSTDSAHLAARK HHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHC GLPYVFAGHFAPQQMKEAIEIYKTLFEPSDVLDEPYVIVCLNTIVAENDDEAQYLASSMA CCCEEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEHHHHCCCCCHHHHHHHHHH QVMVSITRGRMQPVQPPTHELQNILTPREYAMAMERQKISLIGSENTVQQKIQDFMETYG HHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHH EVNEIMAISYIYDKDMQLDSYRRFKNVINQINEKNTL HHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AIKYSALNLVPIREGEDEQTAINDMVNLAQHLDELSYERYWIAEHHNAPNLVSSATALL CEEEECEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH IQHTLEHTKHIRVGSGGIMLPNHAPLIVAEQFGTMATLFPNRVDLGLGRAPGTDMMTASA HHHHHHHHCEEEECCCCEECCCCCCEEEEHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHH LRRDQHDGVYKFPEEVSLLQQYFGPAHQQAYVRAYPAVGKNVPLYILGSSTDSAHLAARK HHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHC GLPYVFAGHFAPQQMKEAIEIYKTLFEPSDVLDEPYVIVCLNTIVAENDDEAQYLASSMA CCCEEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEHHHHCCCCCHHHHHHHHHH QVMVSITRGRMQPVQPPTHELQNILTPREYAMAMERQKISLIGSENTVQQKIQDFMETYG HHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHH EVNEIMAISYIYDKDMQLDSYRRFKNVINQINEKNTL HHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]