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The map label for this gene is sek [H]

Identifier: 57650159

GI number: 57650159

Start: 904800

End: 905528

Strand: Reverse

Name: sek [H]

Synonym: SACOL0886

Alternate gene names: 57650159

Gene position: 905528-904800 (Counterclockwise)

Preceding gene: 57650160

Following gene: 57650158

Centisome position: 32.23

GC content: 26.61

Gene sequence:

>729_bases
ATGAAAAAATTAATAAGCATCTTATTAATAAATATAATAATTTTAGGTGTCTCTAATAGTGCCAGCGCTCAAGGTGATAT
AGGAATTGATAATCTCAGGAATTTTTATACAAAAAAAGACTTCGTAGATTTAAAAGATGTAAAAGACAATGATACTCCTA
TAGCTAATCAACTACAATTTTCAAATGAATCTTATGATTTAATTTCAGAATCAAAAGATTTTAATAAATTTAGTAATTTC
AAGGGAAAAAAACTTGATGTTTTTGGTATTAGTTATAATGGCCAGTGTAACACTAAATACATATATGGCGGAGTCACAGC
TACTAACGAATATCTAGATAAATCTAGAAATATACCTATAAATATATGGATTAATGGAAATCACAAAACTATTTCTACCA
ATAAAGTTTCGACAAATAAAAAATTTGTTACCGCTCAAGAGATTGATGTCAAATTAAGAAAGTACCTTCAAGAAGAATAC
AACATTTATGGACATAACGGCACTAAAAAAGGAGAAGAATATGGTCATAAATCAAAATTTTATTCTGGATTTAATATTGG
TAAAGTAACGTTCCATTTAAATAATAATGACACTTTTTCATATGATTTATTCTACACAGGAGATGATGGGTTACCAAAAA
GTTTTTTAAAAATTTACGAAGACAATAAAACTGTAGAGTCTGAGAAATTCCATTTGGATGTCGATATTTCTTATAAAGAA
ACGATATAA

Upstream 100 bases:

>100_bases
TTTACGATGATAATAAAACTATAGATACAGAGAATTTTCATTTGGATGTAGAGATTTCATATGAGAAGACTGAATAAATA
TAATTTAAGGAGAAAAGGCA

Downstream 100 bases:

>100_bases
ATCTATTAATTATATTATAATCATTATTTTTCGGGTAGCCCGCCTACCCTTATTATTTTTTTGCCAATTTTGAGGAGGGA
TAAGCAAAATGTGGTTAGAA

Product: enterotoxin

Products: NA

Alternate protein names: SEA [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKKLISILLINIIILGVSNSASAQGDIGIDNLRNFYTKKDFVDLKDVKDNDTPIANQLQFSNESYDLISESKDFNKFSNF
KGKKLDVFGISYNGQCNTKYIYGGVTATNEYLDKSRNIPINIWINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEY
NIYGHNGTKKGEEYGHKSKFYSGFNIGKVTFHLNNNDTFSYDLFYTGDDGLPKSFLKIYEDNKTVESEKFHLDVDISYKE
TI

Sequences:

>Translated_242_residues
MKKLISILLINIIILGVSNSASAQGDIGIDNLRNFYTKKDFVDLKDVKDNDTPIANQLQFSNESYDLISESKDFNKFSNF
KGKKLDVFGISYNGQCNTKYIYGGVTATNEYLDKSRNIPINIWINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEY
NIYGHNGTKKGEEYGHKSKFYSGFNIGKVTFHLNNNDTFSYDLFYTGDDGLPKSFLKIYEDNKTVESEKFHLDVDISYKE
TI
>Mature_242_residues
MKKLISILLINIIILGVSNSASAQGDIGIDNLRNFYTKKDFVDLKDVKDNDTPIANQLQFSNESYDLISESKDFNKFSNF
KGKKLDVFGISYNGQCNTKYIYGGVTATNEYLDKSRNIPINIWINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEY
NIYGHNGTKKGEEYGHKSKFYSGFNIGKVTFHLNNNDTFSYDLFYTGDDGLPKSFLKIYEDNKTVESEKFHLDVDISYKE
TI

Specific function: Staphylococcal enterotoxins cause the intoxication staphylococcal food poisoning syndrome. The illness is characterized by high fever, hypotension, diarrhea, shock, and in some cases death [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the staphylococcal/streptococcal toxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008992
- InterPro:   IPR006126
- InterPro:   IPR006173
- InterPro:   IPR016091
- InterPro:   IPR013307
- InterPro:   IPR006123
- InterPro:   IPR006177 [H]

Pfam domain/function: PF02876 Stap_Strp_tox_C; PF01123 Stap_Strp_toxin [H]

EC number: NA

Molecular weight: Translated: 27727; Mature: 27727

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS00278 STAPH_STREP_TOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLISILLINIIILGVSNSASAQGDIGIDNLRNFYTKKDFVDLKDVKDNDTPIANQLQF
CHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEE
SNESYDLISESKDFNKFSNFKGKKLDVFGISYNGQCNTKYIYGGVTATNEYLDKSRNIPI
CCCCCHHHCCCCCCHHHHCCCCCEEEEEEEEECCCCCCEEEECCEECCHHHHHHCCCCEE
NIWINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEYNIYGHNGTKKGEEYGHKSKF
EEEECCCEEEEECCEECCCCEEEEHHHHHHHHHHHHHHHCEEECCCCCCCCHHHCCHHHH
YSGFNIGKVTFHLNNNDTFSYDLFYTGDDGLPKSFLKIYEDNKTVESEKFHLDVDISYKE
CCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCC
TI
CC
>Mature Secondary Structure
MKKLISILLINIIILGVSNSASAQGDIGIDNLRNFYTKKDFVDLKDVKDNDTPIANQLQF
CHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEE
SNESYDLISESKDFNKFSNFKGKKLDVFGISYNGQCNTKYIYGGVTATNEYLDKSRNIPI
CCCCCHHHCCCCCCHHHHCCCCCEEEEEEEEECCCCCCEEEECCEECCHHHHHHCCCCEE
NIWINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEYNIYGHNGTKKGEEYGHKSKF
EEEECCCEEEEECCEECCCCEEEEHHHHHHHHHHHHHHHCEEECCCCCCCCHHHCCHHHH
YSGFNIGKVTFHLNNNDTFSYDLFYTGDDGLPKSFLKIYEDNKTVESEKFHLDVDISYKE
CCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCC
TI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3335483; 3584106; 7628431; 8943278; 7552730; 9191070 [H]