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The map label for this gene is sei [H]

Identifier: 57650160

GI number: 57650160

Start: 905552

End: 906280

Strand: Reverse

Name: sei [H]

Synonym: SACOL0887

Alternate gene names: 57650160

Gene position: 906280-905552 (Counterclockwise)

Preceding gene: 57650161

Following gene: 57650159

Centisome position: 32.26

GC content: 27.98

Gene sequence:

>729_bases
ATGAATAAAATATTTAGAATACTCACTGTTAGCTTGTTTTTCTTCACATTTTTAATAAAAAACAATCTAGCATATGCTGA
TGTAGGGGTAATCAACCTTAGAAACTTTTATGCTAATTATGAACCTGAAAAGCTTCAAGGAGTTAGTTCTGGAAATTTTT
CTACTTCTCATCAATTAGAGTATATTGATGGAAAATACACTTTATATTCACAGTTTCATAATGAATATGAAGCGAAGAGA
TTAAAAGATCATAAAGTAGATATCTTTGGAATAAGTTACTCAGGTCTTTGTAATACAAAATATATGTATGGTGGAATTAC
GTTGGCGAATCAAAATTTAGATAAACCTAGAAATATACCTATTAATCTCTGGGTCAATGGTAAGCAAAATACTATATCTA
CAGACAAAGTTTCTACTCAAAAAAAAGAGGTAACTGCTCAAGAGATTGATATTAAGTTACGAAAATACCTACAAAACGAA
TACAATATATATGGTTTTAATAAAACAAAAAAAGGTCAGGAATATGGATATCAGTCAAAATTTAATTCTGGGTTTAACAA
AGGAAAAATTACTTTCCATTTAAATAATGAACCTTCTTTTACATACGATTTGTTTTACACCGGAACTGGTCAAGCAGAGA
GTTTTTTAAAAATTTACGATGATAATAAAACTATAGATACAGAGAATTTTCATTTGGATGTAGAGATTTCATATGAGAAG
ACTGAATAA

Upstream 100 bases:

>100_bases
CAAGAATTCTATGGATAAAACATTAAAGTGATGGGAAAAGTTGTATTGTGATTAAAAATGCCTATATGGCGTTGTAATAT
AAAAAAAAGGAGCCATCAAA

Downstream 100 bases:

>100_bases
ATATAATTTAAGGAGAAAAGGCAATGAAAAAATTAATAAGCATCTTATTAATAAATATAATAATTTTAGGTGTCTCTAAT
AGTGCCAGCGCTCAAGGTGA

Product: enterotoxin type I

Products: NA

Alternate protein names: SEA [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNKIFRILTVSLFFFTFLIKNNLAYADVGVINLRNFYANYEPEKLQGVSSGNFSTSHQLEYIDGKYTLYSQFHNEYEAKR
LKDHKVDIFGISYSGLCNTKYMYGGITLANQNLDKPRNIPINLWVNGKQNTISTDKVSTQKKEVTAQEIDIKLRKYLQNE
YNIYGFNKTKKGQEYGYQSKFNSGFNKGKITFHLNNEPSFTYDLFYTGTGQAESFLKIYDDNKTIDTENFHLDVEISYEK
TE

Sequences:

>Translated_242_residues
MNKIFRILTVSLFFFTFLIKNNLAYADVGVINLRNFYANYEPEKLQGVSSGNFSTSHQLEYIDGKYTLYSQFHNEYEAKR
LKDHKVDIFGISYSGLCNTKYMYGGITLANQNLDKPRNIPINLWVNGKQNTISTDKVSTQKKEVTAQEIDIKLRKYLQNE
YNIYGFNKTKKGQEYGYQSKFNSGFNKGKITFHLNNEPSFTYDLFYTGTGQAESFLKIYDDNKTIDTENFHLDVEISYEK
TE
>Mature_242_residues
MNKIFRILTVSLFFFTFLIKNNLAYADVGVINLRNFYANYEPEKLQGVSSGNFSTSHQLEYIDGKYTLYSQFHNEYEAKR
LKDHKVDIFGISYSGLCNTKYMYGGITLANQNLDKPRNIPINLWVNGKQNTISTDKVSTQKKEVTAQEIDIKLRKYLQNE
YNIYGFNKTKKGQEYGYQSKFNSGFNKGKITFHLNNEPSFTYDLFYTGTGQAESFLKIYDDNKTIDTENFHLDVEISYEK
TE

Specific function: Staphylococcal enterotoxins cause the intoxication staphylococcal food poisoning syndrome. The illness is characterized by high fever, hypotension, diarrhea, shock, and in some cases death [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the staphylococcal/streptococcal toxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008992
- InterPro:   IPR006126
- InterPro:   IPR006173
- InterPro:   IPR016091
- InterPro:   IPR013307
- InterPro:   IPR006123
- InterPro:   IPR006177 [H]

Pfam domain/function: PF02876 Stap_Strp_tox_C; PF01123 Stap_Strp_toxin [H]

EC number: NA

Molecular weight: Translated: 28185; Mature: 28185

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00277 STAPH_STREP_TOXIN_1 ; PS00278 STAPH_STREP_TOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIFRILTVSLFFFTFLIKNNLAYADVGVINLRNFYANYEPEKLQGVSSGNFSTSHQLE
CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHCCCCHHHHCCCCCCCCCCCCEEE
YIDGKYTLYSQFHNEYEAKRLKDHKVDIFGISYSGLCNTKYMYGGITLANQNLDKPRNIP
EECCCEEEHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCEEEECCCCCCCCCCE
INLWVNGKQNTISTDKVSTQKKEVTAQEIDIKLRKYLQNEYNIYGFNKTKKGQEYGYQSK
EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH
FNSGFNKGKITFHLNNEPSFTYDLFYTGTGQAESFLKIYDDNKTIDTENFHLDVEISYEK
HCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEECCCCEECCCCEEEEEEEEEEC
TE
CC
>Mature Secondary Structure
MNKIFRILTVSLFFFTFLIKNNLAYADVGVINLRNFYANYEPEKLQGVSSGNFSTSHQLE
CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHCCCCHHHHCCCCCCCCCCCCEEE
YIDGKYTLYSQFHNEYEAKRLKDHKVDIFGISYSGLCNTKYMYGGITLANQNLDKPRNIP
EECCCEEEHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCEEEECCCCCCCCCCE
INLWVNGKQNTISTDKVSTQKKEVTAQEIDIKLRKYLQNEYNIYGFNKTKKGQEYGYQSK
EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH
FNSGFNKGKITFHLNNEPSFTYDLFYTGTGQAESFLKIYDDNKTIDTENFHLDVEISYEK
HCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEECCCCEECCCCEEEEEEEEEEC
TE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3335483; 3584106; 7628431; 8943278; 7552730; 9191070 [H]