| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410289
Identifier: 41410289
GI number: 41410289
Start: 4660800
End: 4661870
Strand: Reverse
Name: 41410289
Synonym: MAP4191c
Alternate gene names: NA
Gene position: 4661870-4660800 (Counterclockwise)
Preceding gene: 41410291
Following gene: 41410288
Centisome position: 96.52
GC content: 69.75
Gene sequence:
>1071_bases TTGCCCGCGTACGTCATCAGTAAAGGTTGCCGCGAATCGCGGGAAGCGTACAGTGGGGGCAGCTTGTTATATCGGCTAAA TATTAGCTTGGCTACTACCTCGACGATCTCCGATAGGGGTGCGCACATGACTTCCACCAGGTACGAGGGCGACACCTGGG ACCTGGCCTCCAGCGTGGGGGTGACCGCGACCATGGTCGCGGCGGCCCGCGCGATGGCCACCCGGGCGGACAACCCGCTG ATCAACGACCTGTTCGCCGAACCGCTGGTCAAGGCGGTCGGCGTGGACCTGCTGTCCCGGCTGGCGGGCGGCGAGCTGGA CCCGGCTGAGCTGAACGACGTGCACGACGGCGCCGCCGGGTCCGCCGGGGCGATGTCGCGGATGGCCGACAACATGGCCG TGCGCACCAAGTTCTTCGACGAGTTCTTCCTGAACGCGACCAAGGCCGGCATCGCGCAGGTGGTGATCCTGGCCTCCGGG CTGGACGCGCGCGCCTACCGGCTGGCCTGGCCGGCCGGCACGGTGGTCTACGAGGTGGACCAGCCGCAGGTCATCGACTT CAAAACCACGGCGCTGGCGCAGCTGGGCGCCGCGCCCACGGCCGAGCGCCGGGTGGTGGCCGTCGACCTGCGCGACGACT GGCCCGCCGCGCTGCGCGCCGCCGGGTTCGACCCGGCCCGGCCGACCGCGTGGAGCGCCGAGGGGCTGCTCGGCTACCTG CCGCCGGAGGCGCAGGACCGGCTGCTGGACACCATCACCGAGCTGTCCGCGCCCGGTAGCCGGCTGGCCACCGAGAGCGC GCCCAACCCCGCGCCCGGCGAGGAGGAGAAGCTCAAGGAACGCATGCAGGCGATCTCGCAGCGCTGGCGCGCGCACGGGT TCGACCTCGACATGGCCGGACTGGTCTACTTCGGCGAGCGCAACGAGGCCGCCCCGTATCTGGCCGGCCACGGTTGGCGG CTGAACAGCGTCACCATCCGGGATCTGTTCGCGGCCAACGGACTTGACCCGCTCGATGACGACGACACCCGGATGGGTGA GATGCTCTACACCTGGGGGATCTATGAGTGA
Upstream 100 bases:
>100_bases GGACCAGCGGGTTGGCGTCGTCGGGCACCGCGACGGGCTCCGGCGCGACGCCATAGACCAGTGCCTTCATGGCGCCGCCG CCCCGGCGATCAACACCCTC
Downstream 100 bases:
>100_bases GGGACGCACCGACGGCGACACCTGGGGTCCGGCGCAGAGCGTGGGAGCGACGGCGACCATGGTCGCCGCCGCCCGCGCGG TGGCGTCGCAGGGACCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MPAYVISKGCRESREAYSGGSLLYRLNISLATTSTISDRGAHMTSTRYEGDTWDLASSVGVTATMVAAARAMATRADNPL INDLFAEPLVKAVGVDLLSRLAGGELDPAELNDVHDGAAGSAGAMSRMADNMAVRTKFFDEFFLNATKAGIAQVVILASG LDARAYRLAWPAGTVVYEVDQPQVIDFKTTALAQLGAAPTAERRVVAVDLRDDWPAALRAAGFDPARPTAWSAEGLLGYL PPEAQDRLLDTITELSAPGSRLATESAPNPAPGEEEKLKERMQAISQRWRAHGFDLDMAGLVYFGERNEAAPYLAGHGWR LNSVTIRDLFAANGLDPLDDDDTRMGEMLYTWGIYE
Sequences:
>Translated_356_residues MPAYVISKGCRESREAYSGGSLLYRLNISLATTSTISDRGAHMTSTRYEGDTWDLASSVGVTATMVAAARAMATRADNPL INDLFAEPLVKAVGVDLLSRLAGGELDPAELNDVHDGAAGSAGAMSRMADNMAVRTKFFDEFFLNATKAGIAQVVILASG LDARAYRLAWPAGTVVYEVDQPQVIDFKTTALAQLGAAPTAERRVVAVDLRDDWPAALRAAGFDPARPTAWSAEGLLGYL PPEAQDRLLDTITELSAPGSRLATESAPNPAPGEEEKLKERMQAISQRWRAHGFDLDMAGLVYFGERNEAAPYLAGHGWR LNSVTIRDLFAANGLDPLDDDDTRMGEMLYTWGIYE >Mature_355_residues PAYVISKGCRESREAYSGGSLLYRLNISLATTSTISDRGAHMTSTRYEGDTWDLASSVGVTATMVAAARAMATRADNPLI NDLFAEPLVKAVGVDLLSRLAGGELDPAELNDVHDGAAGSAGAMSRMADNMAVRTKFFDEFFLNATKAGIAQVVILASGL DARAYRLAWPAGTVVYEVDQPQVIDFKTTALAQLGAAPTAERRVVAVDLRDDWPAALRAAGFDPARPTAWSAEGLLGYLP PEAQDRLLDTITELSAPGSRLATESAPNPAPGEEEKLKERMQAISQRWRAHGFDLDMAGLVYFGERNEAAPYLAGHGWRL NSVTIRDLFAANGLDPLDDDDTRMGEMLYTWGIYE
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity [H]
COG id: COG3315
COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011610 - InterPro: IPR007213 [H]
Pfam domain/function: PF04072 LCM [H]
EC number: NA
Molecular weight: Translated: 38376; Mature: 38245
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAYVISKGCRESREAYSGGSLLYRLNISLATTSTISDRGAHMTSTRYEGDTWDLASSVG CCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHCC VTATMVAAARAMATRADNPLINDLFAEPLVKAVGVDLLSRLAGGELDPAELNDVHDGAAG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC SAGAMSRMADNMAVRTKFFDEFFLNATKAGIAQVVILASGLDARAYRLAWPAGTVVYEVD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEECCCCCCEEEEECCCCCEEEECC QPQVIDFKTTALAQLGAAPTAERRVVAVDLRDDWPAALRAAGFDPARPTAWSAEGLLGYL CCEEEEEHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEECC PPEAQDRLLDTITELSAPGSRLATESAPNPAPGEEEKLKERMQAISQRWRAHGFDLDMAG CCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE LVYFGERNEAAPYLAGHGWRLNSVTIRDLFAANGLDPLDDDDTRMGEMLYTWGIYE EEEECCCCCCCCEECCCCEEECCEEHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure PAYVISKGCRESREAYSGGSLLYRLNISLATTSTISDRGAHMTSTRYEGDTWDLASSVG CCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHCC VTATMVAAARAMATRADNPLINDLFAEPLVKAVGVDLLSRLAGGELDPAELNDVHDGAAG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC SAGAMSRMADNMAVRTKFFDEFFLNATKAGIAQVVILASGLDARAYRLAWPAGTVVYEVD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEECCCCCCEEEEECCCCCEEEECC QPQVIDFKTTALAQLGAAPTAERRVVAVDLRDDWPAALRAAGFDPARPTAWSAEGLLGYL CCEEEEEHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEECC PPEAQDRLLDTITELSAPGSRLATESAPNPAPGEEEKLKERMQAISQRWRAHGFDLDMAG CCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE LVYFGERNEAAPYLAGHGWRLNSVTIRDLFAANGLDPLDDDDTRMGEMLYTWGIYE EEEECCCCCCCCEECCCCEEECCEEHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA