Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410288
Identifier: 41410288
GI number: 41410288
Start: 4659887
End: 4660807
Strand: Reverse
Name: 41410288
Synonym: MAP4190c
Alternate gene names: NA
Gene position: 4660807-4659887 (Counterclockwise)
Preceding gene: 41410289
Following gene: 41410287
Centisome position: 96.5
GC content: 71.23
Gene sequence:
>921_bases ATGAGTGAGGGACGCACCGACGGCGACACCTGGGGTCCGGCGCAGAGCGTGGGAGCGACGGCGACCATGGTCGCCGCCGC CCGCGCGGTGGCGTCGCAGGGACCCGACGCGCTGCTCGACGATCCGCTGGCCGAACCGCTGGTGCGGGCGGTGGGACTGG ATCCGTTCATCCGCATCGTCGAGGGCAAGCTCGACTTCCCCGACGACCCGCTGTTCAACCGCCGGGCGCGGGCCGAGCAG ATCACGGTGCGCACCAGGTTCTTCGACGACTTCTTCATCGACGCCACCGAGGCCGGGCTGCGCCAGGCGGTGATCCTGGC CTCCGGCCTGGACACCCGGGCCTACCGGCTGACCTGGCCGGCCGGCACGGTGGTCTACGAGATCGACCAGCCGCAGGTCA TCGCGTTCAAGACCGACACGCTGGCCAACCTCGGCGCGGCCCCCACCGCCGAGCGCCGCACCATCAGCATCGACCTGCGC GACGACTGGCCCGCGGCCCTGCGCGAGGGCGGTTTCGACGTCACCCGGCCGACGGCCTGGAGCGCCGAGGGGCTGTTGCC CTATCTGCCGCCGGAGGCCCAGGACCGGTTGTTCGACAACATCACCGCCCTGTCCGCGCCGGGCAGCCGGCTGGCCACCG AGCACGTGCCGGACCCCAACGCGTTCTCCGACGAGCGGTTGGCCCGCATCTCGGAGCGCTGGCAGCGTCTCGGTCTCAAC CTCAACGCCGCCGACCTGTTCTACCGGGGCGAGCGCAACGTCGTCGCCGACTACCTCACCGGCAAGGGCTGGCGGGTGAC GCCGCATCCGGCCCGACAGTTGTACGCCCGCAACGGTTTCGAGTTCCCCGAGGACGAGATGAGGGCCACCTTCGGTGAGA TGAGCTACGTCGACGCCACCCTCACCGGTGGCCGCGGCTAA
Upstream 100 bases:
>100_bases AACAGCGTCACCATCCGGGATCTGTTCGCGGCCAACGGACTTGACCCGCTCGATGACGACGACACCCGGATGGGTGAGAT GCTCTACACCTGGGGGATCT
Downstream 100 bases:
>100_bases GGTTGCTCGCGATGACACGCACGCATGACGACGAGTGGGACCTGGCGTCCAGCGTCGGCGCCACCGCGACGATGGTCGCG GCCGGCCGCGCCATGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSEGRTDGDTWGPAQSVGATATMVAAARAVASQGPDALLDDPLAEPLVRAVGLDPFIRIVEGKLDFPDDPLFNRRARAEQ ITVRTRFFDDFFIDATEAGLRQAVILASGLDTRAYRLTWPAGTVVYEIDQPQVIAFKTDTLANLGAAPTAERRTISIDLR DDWPAALREGGFDVTRPTAWSAEGLLPYLPPEAQDRLFDNITALSAPGSRLATEHVPDPNAFSDERLARISERWQRLGLN LNAADLFYRGERNVVADYLTGKGWRVTPHPARQLYARNGFEFPEDEMRATFGEMSYVDATLTGGRG
Sequences:
>Translated_306_residues MSEGRTDGDTWGPAQSVGATATMVAAARAVASQGPDALLDDPLAEPLVRAVGLDPFIRIVEGKLDFPDDPLFNRRARAEQ ITVRTRFFDDFFIDATEAGLRQAVILASGLDTRAYRLTWPAGTVVYEIDQPQVIAFKTDTLANLGAAPTAERRTISIDLR DDWPAALREGGFDVTRPTAWSAEGLLPYLPPEAQDRLFDNITALSAPGSRLATEHVPDPNAFSDERLARISERWQRLGLN LNAADLFYRGERNVVADYLTGKGWRVTPHPARQLYARNGFEFPEDEMRATFGEMSYVDATLTGGRG >Mature_305_residues SEGRTDGDTWGPAQSVGATATMVAAARAVASQGPDALLDDPLAEPLVRAVGLDPFIRIVEGKLDFPDDPLFNRRARAEQI TVRTRFFDDFFIDATEAGLRQAVILASGLDTRAYRLTWPAGTVVYEIDQPQVIAFKTDTLANLGAAPTAERRTISIDLRD DWPAALREGGFDVTRPTAWSAEGLLPYLPPEAQDRLFDNITALSAPGSRLATEHVPDPNAFSDERLARISERWQRLGLNL NAADLFYRGERNVVADYLTGKGWRVTPHPARQLYARNGFEFPEDEMRATFGEMSYVDATLTGGRG
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: COG3315
COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4190_MYCPA (Q73S86)
Other databases:
- EMBL: AE016958 - RefSeq: NP_963124.1 - ProteinModelPortal: Q73S86 - SMR: Q73S86 - EnsemblBacteria: EBMYCT00000037669 - GeneID: 2718892 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP4190c - NMPDR: fig|262316.1.peg.4190 - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: NAFSDER - ProtClustDB: CLSK763771 - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 33670; Mature: 33539
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: BINDING 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGRTDGDTWGPAQSVGATATMVAAARAVASQGPDALLDDPLAEPLVRAVGLDPFIRIV CCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCHHHHEE EGKLDFPDDPLFNRRARAEQITVRTRFFDDFFIDATEAGLRQAVILASGLDTRAYRLTWP ECCCCCCCCCCCCCHHHHHEEEEEEEEHHHHHCCHHHHHHHEEEHEECCCCCCEEEEECC AGTVVYEIDQPQVIAFKTDTLANLGAAPTAERRTISIDLRDDWPAALREGGFDVTRPTAW CCEEEEECCCCEEEEEECCHHHHCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCC SAEGLLPYLPPEAQDRLFDNITALSAPGSRLATEHVPDPNAFSDERLARISERWQRLGLN CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC LNAADLFYRGERNVVADYLTGKGWRVTPHPARQLYARNGFEFPEDEMRATFGEMSYVDAT CCHHHEEEECCCCEEEHHHCCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHCHHEEEEE LTGGRG ECCCCC >Mature Secondary Structure SEGRTDGDTWGPAQSVGATATMVAAARAVASQGPDALLDDPLAEPLVRAVGLDPFIRIV CCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCHHHHEE EGKLDFPDDPLFNRRARAEQITVRTRFFDDFFIDATEAGLRQAVILASGLDTRAYRLTWP ECCCCCCCCCCCCCHHHHHEEEEEEEEHHHHHCCHHHHHHHEEEHEECCCCCCEEEEECC AGTVVYEIDQPQVIAFKTDTLANLGAAPTAERRTISIDLRDDWPAALREGGFDVTRPTAW CCEEEEECCCCEEEEEECCHHHHCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCC SAEGLLPYLPPEAQDRLFDNITALSAPGSRLATEHVPDPNAFSDERLARISERWQRLGLN CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC LNAADLFYRGERNVVADYLTGKGWRVTPHPARQLYARNGFEFPEDEMRATFGEMSYVDAT CCHHHEEEECCCCEEEHHHCCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHCHHEEEEE LTGGRG ECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA