Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is lprL
Identifier: 41410186
GI number: 41410186
Start: 4558531
End: 4559670
Strand: Direct
Name: lprL
Synonym: MAP4088
Alternate gene names: NA
Gene position: 4558531-4559670 (Clockwise)
Preceding gene: 41410185
Following gene: 41410187
Centisome position: 94.38
GC content: 69.47
Gene sequence:
>1140_bases ATGCGCCGGGTCGCCGTCGCGGGGCGGCGCGCGCTGGTGGTCGCGCTGGCGGCGATGTTGACGTCGTGCACCTGGAGGGG CATCGCCGACGTGCCGCTGCCGGTCGGCCGCGGCACCGGCGGCGACCACATGACGATCTACGTGCAGATGCCCGACACGT TGGCGCTGAACACCAACAGCCGGGTCCGGGTGGCCGACGTGTGGGTCGGCACGGTACGCGCCATTACCCTCAAGGATTGG GTCGCCACGCTGAGGCTGGACCTCGATCCGGGTGTGCGGCTACCGGCCAACGCCACCGCGAAGATCGGCCAGACCAGCCT GCTGGGCACCCAGCACGTCGAGCTGGCCGCGCCGAAAAACCCTTCCGCGCAACGATTGAAGAGCGGCGACACCCTCCTGC TGCAGAACTCGTCGGCCTATCCCACCGTCGAACGGACGCTGGCCAGCGTCGCGGTGATCCTCAACGGCGGCGGCATCGCC AACCTCGACGCCATCCAGACCGAGGTGCTCAACATCCTCGACGGGCACGCCGGGCAGATCCGCGAATTCCTAGGCCGCCT GGACACTTTCATCACCGAGCTGAGCAGCCAACGCGACGACCTGACCCGGGCGATCGATTCGAGCAACGAACTGCTGACCG TGTTCGCCAACCGCAGGGACACCCTGGATCGGGTGCTGACCGAGCTGCCGCCGCTGATCCGGCATTTCGCCGACACCCGC GAACTTTTCGCCGACGCCACCGAATCGCTGGGCCGATTCAGCGACGCGGCCGACCGGGCGCTCACCGACGCCCGGGCCAA CCTCTACCGCAGCCTGCTGTCGCTGCAACGGCCGTTGCGCCAGCTCGTCCCGGCCGCCCCGTTCGTGGCCGGCGCGTTGA AGCTGGGGCTGACGGCCCCGTTCAACATCGACGACGTCGCGCAGGTGATCCGCGGCGACTACGTCAACGTCTCGGCCGCC CTCGACCTGACGCTGTCCACCATCGACAACACCATGCTCACCGGCACCGGCCTGTCCGGCGCGCTGCGCGCGCTCGAGCA GTCCTGGGGGCGCGACCCCGCCACGATGATCCCCGACGTCCGCTACACGCCCAACCCCAACGACGCCCCGGGCGGACCGC TGGTGGAAAGGGGCGAATGA
Upstream 100 bases:
>100_bases CGGGGGTCACCGCCGCCGGACCGCCGAACGCCTACGACGAGTCGAATCCGCCGTCGCCGCCGTGGTTTTCGCGGCCCACG CCGCCGGGGCCGGGCCGGTG
Downstream 100 bases:
>100_bases AAGATGTTGCCCCGCATGATCAAAACCCAGCTGGTGCTGCTGACGGCGGTGGCGGTGGCCGCGGTGGTCGTCCTCGGCTG GTACTACCTGCGGATCCCGA
Product: LprL
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; Mce Family Lipoe; MCE Family Lipoprotein LprM; Mce Related Protein; MCE-Family Lipoprotein LprL; MCE Family Lipoprotein LprN; MCE Family Lipoprotein; MCE Family Lipoprotein LprK; Mce-Related Protein; MCE Family LipoE; LprM Protein; MCE-Family Protein LprN; MCE-Family LipoE; Fis Family Transcriptional Regulator; Mce Family Protein Mce5E; Lipoprotein
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MRRVAVAGRRALVVALAAMLTSCTWRGIADVPLPVGRGTGGDHMTIYVQMPDTLALNTNSRVRVADVWVGTVRAITLKDW VATLRLDLDPGVRLPANATAKIGQTSLLGTQHVELAAPKNPSAQRLKSGDTLLLQNSSAYPTVERTLASVAVILNGGGIA NLDAIQTEVLNILDGHAGQIREFLGRLDTFITELSSQRDDLTRAIDSSNELLTVFANRRDTLDRVLTELPPLIRHFADTR ELFADATESLGRFSDAADRALTDARANLYRSLLSLQRPLRQLVPAAPFVAGALKLGLTAPFNIDDVAQVIRGDYVNVSAA LDLTLSTIDNTMLTGTGLSGALRALEQSWGRDPATMIPDVRYTPNPNDAPGGPLVERGE
Sequences:
>Translated_379_residues MRRVAVAGRRALVVALAAMLTSCTWRGIADVPLPVGRGTGGDHMTIYVQMPDTLALNTNSRVRVADVWVGTVRAITLKDW VATLRLDLDPGVRLPANATAKIGQTSLLGTQHVELAAPKNPSAQRLKSGDTLLLQNSSAYPTVERTLASVAVILNGGGIA NLDAIQTEVLNILDGHAGQIREFLGRLDTFITELSSQRDDLTRAIDSSNELLTVFANRRDTLDRVLTELPPLIRHFADTR ELFADATESLGRFSDAADRALTDARANLYRSLLSLQRPLRQLVPAAPFVAGALKLGLTAPFNIDDVAQVIRGDYVNVSAA LDLTLSTIDNTMLTGTGLSGALRALEQSWGRDPATMIPDVRYTPNPNDAPGGPLVERGE >Mature_379_residues MRRVAVAGRRALVVALAAMLTSCTWRGIADVPLPVGRGTGGDHMTIYVQMPDTLALNTNSRVRVADVWVGTVRAITLKDW VATLRLDLDPGVRLPANATAKIGQTSLLGTQHVELAAPKNPSAQRLKSGDTLLLQNSSAYPTVERTLASVAVILNGGGIA NLDAIQTEVLNILDGHAGQIREFLGRLDTFITELSSQRDDLTRAIDSSNELLTVFANRRDTLDRVLTELPPLIRHFADTR ELFADATESLGRFSDAADRALTDARANLYRSLLSLQRPLRQLVPAAPFVAGALKLGLTAPFNIDDVAQVIRGDYVNVSAA LDLTLSTIDNTMLTGTGLSGALRALEQSWGRDPATMIPDVRYTPNPNDAPGGPLVERGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40740; Mature: 40740
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVAVAGRRALVVALAAMLTSCTWRGIADVPLPVGRGTGGDHMTIYVQMPDTLALNTNS CCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCC RVRVADVWVGTVRAITLKDWVATLRLDLDPGVRLPANATAKIGQTSLLGTQHVELAAPKN CEEEEEEEECHHHEEHHHHHHHHHEEECCCCCCCCCCCCHHCCCHHHCCCCCEEEECCCC PSAQRLKSGDTLLLQNSSAYPTVERTLASVAVILNGGGIANLDAIQTEVLNILDGHAGQI CCHHHHCCCCEEEEECCCCCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCHHHH REFLGRLDTFITELSSQRDDLTRAIDSSNELLTVFANRRDTLDRVLTELPPLIRHFADTR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH ELFADATESLGRFSDAADRALTDARANLYRSLLSLQRPLRQLVPAAPFVAGALKLGLTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC FNIDDVAQVIRGDYVNVSAALDLTLSTIDNTMLTGTGLSGALRALEQSWGRDPATMIPDV CCHHHHHHHHCCCCEEEEHHHEEEHHHHCCCEEECCCHHHHHHHHHHHHCCCCHHHCCCC RYTPNPNDAPGGPLVERGE EECCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRVAVAGRRALVVALAAMLTSCTWRGIADVPLPVGRGTGGDHMTIYVQMPDTLALNTNS CCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCC RVRVADVWVGTVRAITLKDWVATLRLDLDPGVRLPANATAKIGQTSLLGTQHVELAAPKN CEEEEEEEECHHHEEHHHHHHHHHEEECCCCCCCCCCCCHHCCCHHHCCCCCEEEECCCC PSAQRLKSGDTLLLQNSSAYPTVERTLASVAVILNGGGIANLDAIQTEVLNILDGHAGQI CCHHHHCCCCEEEEECCCCCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCHHHH REFLGRLDTFITELSSQRDDLTRAIDSSNELLTVFANRRDTLDRVLTELPPLIRHFADTR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH ELFADATESLGRFSDAADRALTDARANLYRSLLSLQRPLRQLVPAAPFVAGALKLGLTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC FNIDDVAQVIRGDYVNVSAALDLTLSTIDNTMLTGTGLSGALRALEQSWGRDPATMIPDV CCHHHHHHHHCCCCEEEEHHHEEEHHHHCCCEEECCCHHHHHHHHHHHHCCCCHHHCCCC RYTPNPNDAPGGPLVERGE EECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA