Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410185

Identifier: 41410185

GI number: 41410185

Start: 4557032

End: 4558531

Strand: Direct

Name: 41410185

Synonym: MAP4087

Alternate gene names: NA

Gene position: 4557032-4558531 (Clockwise)

Preceding gene: 41410184

Following gene: 41410186

Centisome position: 94.35

GC content: 68.13

Gene sequence:

>1500_bases
ATGAGCACCATCTTCGACATCCGAAACCTGCGGCTGCCCAAGGTGTCCGCCCGGGTGCTGGTGATCGCGGCGCTGGCGGC
GGTCTTCGTCTTCATCGCGGCCGTCGCCGGCGTCCAGCTGTACCGCAAGCTCACCACGACCACGGTCGTGGCCTACTTCT
CCGAGACGCTGGCGCTGTATCCCGGCGACCGGGTGCAGATCATGGGCGTGCGGGTGGGTTCGATCGACAAGATCGAGCCG
GCCGGCGACAAGATGCGAGTCACGTTGCACTACAACAACAAATACCGTGTCCCGGCGAACGCGACCGCGTCGATCCTCAA
CCCCAGCCTGGTGGCCTCGCGCACCATCCAGCTGTCGCCGCCCTACACCGGCGGGCCGGTGCTGCGCGACGGCGCCGTCA
TCCCGATCGAGCGCACCCGGGTGCCCGTCGAGTGGGACCAGCTGCGGGACTCCATCAACGCCATCCTGCGCCAGCTCGGC
CCCACCCCCCAGCAGCCGGTGGGGCCGTTCGGCGACATCATCGAATCGGCCGCCGACAATCTGTCCGGCAAGGGCAAACA
GGTCAACGAGACCCTGAACAGCCTGTCGCAGGCGCTGACCGCGCTCAACGAGGGCCGCGGCGATTTCGTCGCCATCACCA
AGAGCCTGGCCCGGTTCGTCACCGCGCTGTACCAGCACAAGCAACAGTTCGTCGCGCTCAACGACAACCTGGCCCAGTTC
ACCGACTGGTTCACCCAATCCGACCACCAGGTGAGCGACACCATCGCCCATCTCGACCAGGTGCTGGACGCGGCCCGAAA
GTTCGTGAACGACAACGGATCCGCACTGACCCACGACGTCGGCAACCTCGCCGACGTGACCACCACGATCCTGCAACCCG
AGCCGCGCGACGGCCTGGAAACCGCGCTGCACGTGCTGCCCACCTTCGCCGGCAACTTCAACAACCTCTACCAGCCGGCG
CACAGTTCGCTGGTCGGCCTGTTCGTGTTCCCCAACTTCGCCAACCCGATCCACTTCCTGTGCAGCGCCATTCAGGCCGG
CAGCCGGCTGGGCTACCAGGACTCGGCCGAACTGTGCGCACAGTATCTGGCCCCGGTTCTCGACGCCATCAAGTTCAATT
ACCCACCGGCCGGCCTGAACCCGTTCAACTCGGCGGCCACGCTGCCCAAGGAGGTGGCTTACTCCGAGGAGCGACTGCGC
CCGCCGCCCGGATACAAGGACACCACCGTCCCGGGCATCTTCGCCCGCGACACCCCGTTCTCCCACGGCAACCACGAGCC
GGGGTGGGTGGTCGCGCCGGGAATGCAGGGCACCGACGTCCAGCCGTTCACCGCCGGCATGCTCACCCCCGAATCGCTGG
CCGAGCTCATGGGTGGCCCGGACGCCGCGCCGCCGCCGCCGGGGGTCACCGCCGCCGGACCGCCGAACGCCTACGACGAG
TCGAATCCGCCGTCGCCGCCGTGGTTTTCGCGGCCCACGCCGCCGGGGCCGGGCCGGTGA

Upstream 100 bases:

>100_bases
CCCCGCCCGACGTCCCCGGCACCCCGGTGCCGCTGCCGGTGCACGCCCCGCCGGGGGCGCGCACCGAGAACCCGCCCGAC
GCGACAGGGGGGAGCACCCG

Downstream 100 bases:

>100_bases
TGCGCCGGGTCGCCGTCGCGGGGCGGCGCGCGCTGGTGGTCGCGCTGGCGGCGATGTTGACGTCGTGCACCTGGAGGGGC
ATCGCCGACGTGCCGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family D; MCE Family Protein; Mce Family D; MCE-Family Protein; Mce Family Lipoe; Mammalian Cell Entry Related Domain Protein; MCE Family Lipoprotein LprM; MCE Family Lipoprotein; Mce Family F; Mce-Related Protein; MCE-Family; MCE-Family C; Virulence Factor MCE-Like Protein; LOW QUALITY PROTEIN Protein

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MSTIFDIRNLRLPKVSARVLVIAALAAVFVFIAAVAGVQLYRKLTTTTVVAYFSETLALYPGDRVQIMGVRVGSIDKIEP
AGDKMRVTLHYNNKYRVPANATASILNPSLVASRTIQLSPPYTGGPVLRDGAVIPIERTRVPVEWDQLRDSINAILRQLG
PTPQQPVGPFGDIIESAADNLSGKGKQVNETLNSLSQALTALNEGRGDFVAITKSLARFVTALYQHKQQFVALNDNLAQF
TDWFTQSDHQVSDTIAHLDQVLDAARKFVNDNGSALTHDVGNLADVTTTILQPEPRDGLETALHVLPTFAGNFNNLYQPA
HSSLVGLFVFPNFANPIHFLCSAIQAGSRLGYQDSAELCAQYLAPVLDAIKFNYPPAGLNPFNSAATLPKEVAYSEERLR
PPPGYKDTTVPGIFARDTPFSHGNHEPGWVVAPGMQGTDVQPFTAGMLTPESLAELMGGPDAAPPPPGVTAAGPPNAYDE
SNPPSPPWFSRPTPPGPGR

Sequences:

>Translated_499_residues
MSTIFDIRNLRLPKVSARVLVIAALAAVFVFIAAVAGVQLYRKLTTTTVVAYFSETLALYPGDRVQIMGVRVGSIDKIEP
AGDKMRVTLHYNNKYRVPANATASILNPSLVASRTIQLSPPYTGGPVLRDGAVIPIERTRVPVEWDQLRDSINAILRQLG
PTPQQPVGPFGDIIESAADNLSGKGKQVNETLNSLSQALTALNEGRGDFVAITKSLARFVTALYQHKQQFVALNDNLAQF
TDWFTQSDHQVSDTIAHLDQVLDAARKFVNDNGSALTHDVGNLADVTTTILQPEPRDGLETALHVLPTFAGNFNNLYQPA
HSSLVGLFVFPNFANPIHFLCSAIQAGSRLGYQDSAELCAQYLAPVLDAIKFNYPPAGLNPFNSAATLPKEVAYSEERLR
PPPGYKDTTVPGIFARDTPFSHGNHEPGWVVAPGMQGTDVQPFTAGMLTPESLAELMGGPDAAPPPPGVTAAGPPNAYDE
SNPPSPPWFSRPTPPGPGR
>Mature_498_residues
STIFDIRNLRLPKVSARVLVIAALAAVFVFIAAVAGVQLYRKLTTTTVVAYFSETLALYPGDRVQIMGVRVGSIDKIEPA
GDKMRVTLHYNNKYRVPANATASILNPSLVASRTIQLSPPYTGGPVLRDGAVIPIERTRVPVEWDQLRDSINAILRQLGP
TPQQPVGPFGDIIESAADNLSGKGKQVNETLNSLSQALTALNEGRGDFVAITKSLARFVTALYQHKQQFVALNDNLAQFT
DWFTQSDHQVSDTIAHLDQVLDAARKFVNDNGSALTHDVGNLADVTTTILQPEPRDGLETALHVLPTFAGNFNNLYQPAH
SSLVGLFVFPNFANPIHFLCSAIQAGSRLGYQDSAELCAQYLAPVLDAIKFNYPPAGLNPFNSAATLPKEVAYSEERLRP
PPGYKDTTVPGIFARDTPFSHGNHEPGWVVAPGMQGTDVQPFTAGMLTPESLAELMGGPDAAPPPPGVTAAGPPNAYDES
NPPSPPWFSRPTPPGPGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53716; Mature: 53585

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIFDIRNLRLPKVSARVLVIAALAAVFVFIAAVAGVQLYRKLTTTTVVAYFSETLALY
CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGDRVQIMGVRVGSIDKIEPAGDKMRVTLHYNNKYRVPANATASILNPSLVASRTIQLSP
CCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCEEECCCCCHHHHCCCHHHHCCEEEECC
PYTGGPVLRDGAVIPIERTRVPVEWDQLRDSINAILRQLGPTPQQPVGPFGDIIESAADN
CCCCCCEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
LSGKGKQVNETLNSLSQALTALNEGRGDFVAITKSLARFVTALYQHKQQFVALNDNLAQF
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHH
TDWFTQSDHQVSDTIAHLDQVLDAARKFVNDNGSALTHDVGNLADVTTTILQPEPRDGLE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHH
TALHVLPTFAGNFNNLYQPAHSSLVGLFVFPNFANPIHFLCSAIQAGSRLGYQDSAELCA
HHHHHHHHHCCCHHHHHCHHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
QYLAPVLDAIKFNYPPAGLNPFNSAATLPKEVAYSEERLRPPPGYKDTTVPGIFARDTPF
HHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHCCHHHCCCCCCCCCCCCCCEEECCCCC
SHGNHEPGWVVAPGMQGTDVQPFTAGMLTPESLAELMGGPDAAPPPPGVTAAGPPNAYDE
CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
SNPPSPPWFSRPTPPGPGR
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STIFDIRNLRLPKVSARVLVIAALAAVFVFIAAVAGVQLYRKLTTTTVVAYFSETLALY
CCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGDRVQIMGVRVGSIDKIEPAGDKMRVTLHYNNKYRVPANATASILNPSLVASRTIQLSP
CCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCEEECCCCCHHHHCCCHHHHCCEEEECC
PYTGGPVLRDGAVIPIERTRVPVEWDQLRDSINAILRQLGPTPQQPVGPFGDIIESAADN
CCCCCCEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
LSGKGKQVNETLNSLSQALTALNEGRGDFVAITKSLARFVTALYQHKQQFVALNDNLAQF
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHH
TDWFTQSDHQVSDTIAHLDQVLDAARKFVNDNGSALTHDVGNLADVTTTILQPEPRDGLE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHH
TALHVLPTFAGNFNNLYQPAHSSLVGLFVFPNFANPIHFLCSAIQAGSRLGYQDSAELCA
HHHHHHHHHCCCHHHHHCHHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
QYLAPVLDAIKFNYPPAGLNPFNSAATLPKEVAYSEERLRPPPGYKDTTVPGIFARDTPF
HHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHCCHHHCCCCCCCCCCCCCCEEECCCCC
SHGNHEPGWVVAPGMQGTDVQPFTAGMLTPESLAELMGGPDAAPPPPGVTAAGPPNAYDE
CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
SNPPSPPWFSRPTPPGPGR
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA