Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410175
Identifier: 41410175
GI number: 41410175
Start: 4544877
End: 4547252
Strand: Reverse
Name: 41410175
Synonym: MAP4077c
Alternate gene names: NA
Gene position: 4547252-4544877 (Counterclockwise)
Preceding gene: 41410178
Following gene: 41410173
Centisome position: 94.15
GC content: 69.65
Gene sequence:
>2376_bases ATGCGAGTTGACGGGCGCGACATCATCGTCTCCGGCAGCTTGCTGCAGCCGCTGACCCGGCGGACCAACGACATCCTGCG GCTCGGGATGGCGCTGATCTTCCTGGCGGTGGTGATCACGGGTTCGGTGATCACCCGCCCGCAGTGGATCGCGCTGGAGA AATCGGTCTCCCAGATCGTCGGTGTCCTCTCGCCCACCCAATCCGATGTCGTCTACCTGGTGTACGGGTTGGCGATCGTG GCGTTGCCGTTCATGATCCTGATCGGTCTCATCGCGGCCGGGCAGTGGAAGCTGTTGGGCGCCTACGCCGCCGCGGGGCT GAGCGCCATCGTCTTGTTGTCGATCAGCGGCACCGGATTGGCCGCGCCGCGATGGCATTTCGACGTCCTCGACCGGCTCA CCACGCTGCCGGCGCAATTGCTCGATGACCCGCGCTGGATCGGGATGCTGGCGGCGGTGCTGACGGTGTCGGGTCCGTGG CTGCCGGCGCGCTGGCGGCGCTGGTGGTGGGCGCTGCTGCTGGCGTTCGTGCCGATCCATCTTGTGGTCAGCGCGATCGT CCCGGCGCGCTCGCTGGTCGGTTTGGCGGTCGGCTGGGTGGTCGGGGCGCTGGTGGTGCTCGTCGTGGGCACGCCGGCGC TCGAGGTTCCGCTGGACGCCGCGGTGCGGGCGTTGGCCAAGGCCGGTTTCGAGGTTTGCCGGCTCACCGTGGTCCGGCCG GCCGGCCGCGGCCCGCTCATTCTGTCCGCCGACGGCCAGGACGCCGACCACACGGCCCTGATCGAGTTGTACGGCCCGCA CCAACGCAGCGGCGGGGCGTTGCGCCAGCTGTGGGGCAAGCTCAAGCTGCGCGACGCCGAGACCGCGCCGCTGCTGACCT CGATGCGCCGCGCGGTGGAGCACCGCGCGCTGATGGCCATCGCGATCGGCGAGGCCGGCCTGGCCAACACCGCGACGGTG GCCGTCGCCACCCTGGACCGGGGCTGGATGCTGTACTCGCACAAGCCTCCTCGCGGCACGCCCATCGACCGATGCGCAAA AACCACACCGGTGCAACGGCTCTGGGAGGCGTTGCGGGTGCTCAACGACCACCAGATCGCCCACGGGGACCTGCGCGCCC ACCACATCACCGTCGACGACGGGGCCGTGTTGTTCGGCGGCTTCGGCAGCGCCGAGTACGGGGCCACCGAGGCGCAGCTG CAATCCGACATCGCGCAGCTGTTGGTGACGACGTCGGCGCACTACGACCCGAAGTCCGCGGTGCGCGCCGCCATCGACGT CTTCGGCGCAGACACCATTTTGTCGGCGTCCCGGCGGCTCACCAAAGTCGCTGTGCCCAAATCGGTTCGGCGTTCGGCGC CCGACTCGGGGGCCGTCATCTCGGGCGCCCGCGCCGAGGTGAAGCGGCAAACGGGCGCCGACCAGATCAAACCGCAGACC ATCACCCGGTTCACCCGCAGCCAGATCATTCAGCTGGTGCTGTTCGGGGCGTTGGTCTACGTCGCGTATCCGTTCATCAG CACGGCGCCGACGTTCTTCTCCCAGCTGCGCACCGCGGACTGGTGGTGGGCGCTGCTGGGCTTGCTGGTGTCGGCGCTGA CCTATGTCGGCGCGGCCGCGGCGCTGTGGGCCTGCGCCGACGGCATGGTGAACTTCTGGATGCTGTCAATCGCGCAGGTG GCCAACACCTTTGCCGCGACCACCACGCCGGCCGGTGTCGGCGGGCTGGCGTTGTCCACCCGCTTCCTGCAAAAGAGCGG CCTGTCGGCGATGCGGGCGACTGCGGCGGTCGCGCTGCAGCAGTCGGTGCAGGTGATCGCGCATCTGGCGCTGCTGGTGC TGTTCAGCGCGGCGGCCGGCGCATCGATGAATCTGTCGCATTTCGTGCCCAGCGCAACCATGCTGTATCTGATCGCGGGT GTGGCGCTGGGCATCGTCGGCACCTTCCTGTTCGTGCCCACACTGCGCAGGTGGCTGGCCACCGAGGTGCGCCCGAAGCT GGACGAGGTGGTGAGCGACCTGGCCAAGCTCGCCCGCGAACCGCGGCGGCTGGCTCTGATCCTGTTGGGTTGCGCGGGAA CGACTCTCGGTGCGGCGCTGGCGTTGTGGGCCAGCATTCAGGCCTTCGGCGGCGACACCACGTTCGTCGCCGTCACCGTG GTGACGATGGTCGGCGGGACGCTGGCCTCGGCCGCGCCGACGCCCGGCGGTGTCGGGGCGGTCGAAGCGGCGCTGATCGG TGGGCTGGCCGCGTTCGGGGTGCCGGCGGCCATCGGGGTGCCGGCCGTGCTGCTGTATCGGATGCTGACCTGCTGGCTGC CGGTGTTCGTCGGCTGGCCGGTGATGCGCTGGCTGACCAAGCACGAGATGGTCTGA
Upstream 100 bases:
>100_bases TGTCAACCAAGCGGGGATTGAGTTAACTTGTCGGCGGGCCGATCAGCGGCCGTGAGCGCGGTGTCGGCGATGCCGGGCGA ATCCGGAGGATCGTTGATAG
Downstream 100 bases:
>100_bases GGGTCAACGGCTCTCCGGTTCGGCCTGGGTGTCCACCAGAACCGTTGTGGTGCGGGTGCTTTGGCCGACGGTGGTGGTCA AGGACACCAGGTAGTAGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein-Like Protein; Phosphoesterase PA-Phosphatase-Like Protein
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MRVDGRDIIVSGSLLQPLTRRTNDILRLGMALIFLAVVITGSVITRPQWIALEKSVSQIVGVLSPTQSDVVYLVYGLAIV ALPFMILIGLIAAGQWKLLGAYAAAGLSAIVLLSISGTGLAAPRWHFDVLDRLTTLPAQLLDDPRWIGMLAAVLTVSGPW LPARWRRWWWALLLAFVPIHLVVSAIVPARSLVGLAVGWVVGALVVLVVGTPALEVPLDAAVRALAKAGFEVCRLTVVRP AGRGPLILSADGQDADHTALIELYGPHQRSGGALRQLWGKLKLRDAETAPLLTSMRRAVEHRALMAIAIGEAGLANTATV AVATLDRGWMLYSHKPPRGTPIDRCAKTTPVQRLWEALRVLNDHQIAHGDLRAHHITVDDGAVLFGGFGSAEYGATEAQL QSDIAQLLVTTSAHYDPKSAVRAAIDVFGADTILSASRRLTKVAVPKSVRRSAPDSGAVISGARAEVKRQTGADQIKPQT ITRFTRSQIIQLVLFGALVYVAYPFISTAPTFFSQLRTADWWWALLGLLVSALTYVGAAAALWACADGMVNFWMLSIAQV ANTFAATTTPAGVGGLALSTRFLQKSGLSAMRATAAVALQQSVQVIAHLALLVLFSAAAGASMNLSHFVPSATMLYLIAG VALGIVGTFLFVPTLRRWLATEVRPKLDEVVSDLAKLAREPRRLALILLGCAGTTLGAALALWASIQAFGGDTTFVAVTV VTMVGGTLASAAPTPGGVGAVEAALIGGLAAFGVPAAIGVPAVLLYRMLTCWLPVFVGWPVMRWLTKHEMV
Sequences:
>Translated_791_residues MRVDGRDIIVSGSLLQPLTRRTNDILRLGMALIFLAVVITGSVITRPQWIALEKSVSQIVGVLSPTQSDVVYLVYGLAIV ALPFMILIGLIAAGQWKLLGAYAAAGLSAIVLLSISGTGLAAPRWHFDVLDRLTTLPAQLLDDPRWIGMLAAVLTVSGPW LPARWRRWWWALLLAFVPIHLVVSAIVPARSLVGLAVGWVVGALVVLVVGTPALEVPLDAAVRALAKAGFEVCRLTVVRP AGRGPLILSADGQDADHTALIELYGPHQRSGGALRQLWGKLKLRDAETAPLLTSMRRAVEHRALMAIAIGEAGLANTATV AVATLDRGWMLYSHKPPRGTPIDRCAKTTPVQRLWEALRVLNDHQIAHGDLRAHHITVDDGAVLFGGFGSAEYGATEAQL QSDIAQLLVTTSAHYDPKSAVRAAIDVFGADTILSASRRLTKVAVPKSVRRSAPDSGAVISGARAEVKRQTGADQIKPQT ITRFTRSQIIQLVLFGALVYVAYPFISTAPTFFSQLRTADWWWALLGLLVSALTYVGAAAALWACADGMVNFWMLSIAQV ANTFAATTTPAGVGGLALSTRFLQKSGLSAMRATAAVALQQSVQVIAHLALLVLFSAAAGASMNLSHFVPSATMLYLIAG VALGIVGTFLFVPTLRRWLATEVRPKLDEVVSDLAKLAREPRRLALILLGCAGTTLGAALALWASIQAFGGDTTFVAVTV VTMVGGTLASAAPTPGGVGAVEAALIGGLAAFGVPAAIGVPAVLLYRMLTCWLPVFVGWPVMRWLTKHEMV >Mature_791_residues MRVDGRDIIVSGSLLQPLTRRTNDILRLGMALIFLAVVITGSVITRPQWIALEKSVSQIVGVLSPTQSDVVYLVYGLAIV ALPFMILIGLIAAGQWKLLGAYAAAGLSAIVLLSISGTGLAAPRWHFDVLDRLTTLPAQLLDDPRWIGMLAAVLTVSGPW LPARWRRWWWALLLAFVPIHLVVSAIVPARSLVGLAVGWVVGALVVLVVGTPALEVPLDAAVRALAKAGFEVCRLTVVRP AGRGPLILSADGQDADHTALIELYGPHQRSGGALRQLWGKLKLRDAETAPLLTSMRRAVEHRALMAIAIGEAGLANTATV AVATLDRGWMLYSHKPPRGTPIDRCAKTTPVQRLWEALRVLNDHQIAHGDLRAHHITVDDGAVLFGGFGSAEYGATEAQL QSDIAQLLVTTSAHYDPKSAVRAAIDVFGADTILSASRRLTKVAVPKSVRRSAPDSGAVISGARAEVKRQTGADQIKPQT ITRFTRSQIIQLVLFGALVYVAYPFISTAPTFFSQLRTADWWWALLGLLVSALTYVGAAAALWACADGMVNFWMLSIAQV ANTFAATTTPAGVGGLALSTRFLQKSGLSAMRATAAVALQQSVQVIAHLALLVLFSAAAGASMNLSHFVPSATMLYLIAG VALGIVGTFLFVPTLRRWLATEVRPKLDEVVSDLAKLAREPRRLALILLGCAGTTLGAALALWASIQAFGGDTTFVAVTV VTMVGGTLASAAPTPGGVGAVEAALIGGLAAFGVPAAIGVPAVLLYRMLTCWLPVFVGWPVMRWLTKHEMV
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83887; Mature: 83887
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVDGRDIIVSGSLLQPLTRRTNDILRLGMALIFLAVVITGSVITRPQWIALEKSVSQIV CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHH GVLSPTQSDVVYLVYGLAIVALPFMILIGLIAAGQWKLLGAYAAAGLSAIVLLSISGTGL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCCC AAPRWHFDVLDRLTTLPAQLLDDPRWIGMLAAVLTVSGPWLPARWRRWWWALLLAFVPIH CCCCHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LVVSAIVPARSLVGLAVGWVVGALVVLVVGTPALEVPLDAAVRALAKAGFEVCRLTVVRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHEEEECC AGRGPLILSADGQDADHTALIELYGPHQRSGGALRQLWGKLKLRDAETAPLLTSMRRAVE CCCCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH HRALMAIAIGEAGLANTATVAVATLDRGWMLYSHKPPRGTPIDRCAKTTPVQRLWEALRV HHHHHHEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHH LNDHQIAHGDLRAHHITVDDGAVLFGGFGSAEYGATEAQLQSDIAQLLVTTSAHYDPKSA HCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH VRAAIDVFGADTILSASRRLTKVAVPKSVRRSAPDSGAVISGARAEVKRQTGADQIKPQT HHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEECCHHHHHHHHCCCCCCCHHH ITRFTRSQIIQLVLFGALVYVAYPFISTAPTFFSQLRTADWWWALLGLLVSALTYVGAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ALWACADGMVNFWMLSIAQVANTFAATTTPAGVGGLALSTRFLQKSGLSAMRATAAVALQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH QSVQVIAHLALLVLFSAAAGASMNLSHFVPSATMLYLIAGVALGIVGTFLFVPTLRRWLA HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEVRPKLDEVVSDLAKLAREPRRLALILLGCAGTTLGAALALWASIQAFGGDTTFVAVTV HHCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHH VTMVGGTLASAAPTPGGVGAVEAALIGGLAAFGVPAAIGVPAVLLYRMLTCWLPVFVGWP HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VMRWLTKHEMV HHHHHHHHCCC >Mature Secondary Structure MRVDGRDIIVSGSLLQPLTRRTNDILRLGMALIFLAVVITGSVITRPQWIALEKSVSQIV CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHH GVLSPTQSDVVYLVYGLAIVALPFMILIGLIAAGQWKLLGAYAAAGLSAIVLLSISGTGL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCCC AAPRWHFDVLDRLTTLPAQLLDDPRWIGMLAAVLTVSGPWLPARWRRWWWALLLAFVPIH CCCCHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LVVSAIVPARSLVGLAVGWVVGALVVLVVGTPALEVPLDAAVRALAKAGFEVCRLTVVRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHEEEECC AGRGPLILSADGQDADHTALIELYGPHQRSGGALRQLWGKLKLRDAETAPLLTSMRRAVE CCCCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH HRALMAIAIGEAGLANTATVAVATLDRGWMLYSHKPPRGTPIDRCAKTTPVQRLWEALRV HHHHHHEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHH LNDHQIAHGDLRAHHITVDDGAVLFGGFGSAEYGATEAQLQSDIAQLLVTTSAHYDPKSA HCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH VRAAIDVFGADTILSASRRLTKVAVPKSVRRSAPDSGAVISGARAEVKRQTGADQIKPQT HHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEECCHHHHHHHHCCCCCCCHHH ITRFTRSQIIQLVLFGALVYVAYPFISTAPTFFSQLRTADWWWALLGLLVSALTYVGAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ALWACADGMVNFWMLSIAQVANTFAATTTPAGVGGLALSTRFLQKSGLSAMRATAAVALQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH QSVQVIAHLALLVLFSAAAGASMNLSHFVPSATMLYLIAGVALGIVGTFLFVPTLRRWLA HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEVRPKLDEVVSDLAKLAREPRRLALILLGCAGTTLGAALALWASIQAFGGDTTFVAVTV HHCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHH VTMVGGTLASAAPTPGGVGAVEAALIGGLAAFGVPAAIGVPAVLLYRMLTCWLPVFVGWP HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VMRWLTKHEMV HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA