Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is lpqN
Identifier: 41410173
GI number: 41410173
Start: 4541349
End: 4542026
Strand: Reverse
Name: lpqN
Synonym: MAP4075c
Alternate gene names: NA
Gene position: 4542026-4541349 (Counterclockwise)
Preceding gene: 41410175
Following gene: 41410168
Centisome position: 94.04
GC content: 67.11
Gene sequence:
>678_bases ATGAAACACTTGACTCTAGCAACGATTTCCGTGGCGCTGAGTTTAGCGCTGGTGGGCTGCGGCCACGATCACAAATCCGG TGACAAAACGTCGTCGTCGACGTCGACCTCGACCTCCACGTCGACGGCGACGTCCTCGAAATCCAGCACCGCGCCGGCGG CGCAAGCCAAATACACCATCGCCGACTACGTGAAGGACAACCACATCTCCGAGACCCCGGTCCACCGCGGCGATCCCGGC CCGAACGTCGACCTGCCGGTGCCCGCCGGCTGGCAGCTCAACCAGAACTCCGGCACCTCCTACGGCGGCATCGTGCAGAG CCAGCCCGCCGACCCGTCCGACCCGCCCACCGTGTCGGCGCTGTTCTCCAAGCTGACCGGCGACGTCGACCCGGCGAAGA TCATCCAGTACGCCCCGGGCGAGGTGCAGAACCTGCCCGGGTACTCCGGCAGCGGTGACGGCTCGGCGTCCACGCTGGGC GGTTACCAGGCCTGGCAGTTGGGCGGCACCTACCAGCGCGGCGGCAAGACCCGCGTCATCGCGCAGAAGACGGTGGTGAT CCCCAGCCAGGGCGCGGTCTACGTGCTGCAGCTCAACGCCGACGGGCTGGAGAGCGACCAGGGCCCGTTGATGGACGCCA CCCACATCATCGACGAGCAGACCACCATCACGGGCTGA
Upstream 100 bases:
>100_bases AGTCCAAAAGATGCCGGCAAACTTTCAAAGCATTTCCGCTACTGTCGTGGCAGCGCGGCCGGCCGCAGGTAACGGCCCCA ATTGTCGGGAGATTGGATTA
Downstream 100 bases:
>100_bases CGGCGGCGGCGTTCAGCCGGAGCCGGCCTCGCCGGCGCCGGGCGGGCGCAGGTGGGCGGTGCGCAGTCGCTGGTCGAACC GCGAGCGCGCGGTGATGACC
Product: LpqN
Products: NA
Alternate protein names: MK35 Lipoprotein; Protein Kinase; Serine/Threonine-Protein Kinase PknE
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MKHLTLATISVALSLALVGCGHDHKSGDKTSSSTSTSTSTSTATSSKSSTAPAAQAKYTIADYVKDNHISETPVHRGDPG PNVDLPVPAGWQLNQNSGTSYGGIVQSQPADPSDPPTVSALFSKLTGDVDPAKIIQYAPGEVQNLPGYSGSGDGSASTLG GYQAWQLGGTYQRGGKTRVIAQKTVVIPSQGAVYVLQLNADGLESDQGPLMDATHIIDEQTTITG
Sequences:
>Translated_225_residues MKHLTLATISVALSLALVGCGHDHKSGDKTSSSTSTSTSTSTATSSKSSTAPAAQAKYTIADYVKDNHISETPVHRGDPG PNVDLPVPAGWQLNQNSGTSYGGIVQSQPADPSDPPTVSALFSKLTGDVDPAKIIQYAPGEVQNLPGYSGSGDGSASTLG GYQAWQLGGTYQRGGKTRVIAQKTVVIPSQGAVYVLQLNADGLESDQGPLMDATHIIDEQTTITG >Mature_225_residues MKHLTLATISVALSLALVGCGHDHKSGDKTSSSTSTSTSTSTATSSKSSTAPAAQAKYTIADYVKDNHISETPVHRGDPG PNVDLPVPAGWQLNQNSGTSYGGIVQSQPADPSDPPTVSALFSKLTGDVDPAKIIQYAPGEVQNLPGYSGSGDGSASTLG GYQAWQLGGTYQRGGKTRVIAQKTVVIPSQGAVYVLQLNADGLESDQGPLMDATHIIDEQTTITG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23155; Mature: 23155
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLTLATISVALSLALVGCGHDHKSGDKTSSSTSTSTSTSTATSSKSSTAPAAQAKYTI CCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ADYVKDNHISETPVHRGDPGPNVDLPVPAGWQLNQNSGTSYGGIVQSQPADPSDPPTVSA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCCCHHHH LFSKLTGDVDPAKIIQYAPGEVQNLPGYSGSGDGSASTLGGYQAWQLGGTYQRGGKTRVI HHHHHCCCCCHHHHEEECCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCEEEE AQKTVVIPSQGAVYVLQLNADGLESDQGPLMDATHIIDEQTTITG EEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCEECCC >Mature Secondary Structure MKHLTLATISVALSLALVGCGHDHKSGDKTSSSTSTSTSTSTATSSKSSTAPAAQAKYTI CCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ADYVKDNHISETPVHRGDPGPNVDLPVPAGWQLNQNSGTSYGGIVQSQPADPSDPPTVSA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCCCHHHH LFSKLTGDVDPAKIIQYAPGEVQNLPGYSGSGDGSASTLGGYQAWQLGGTYQRGGKTRVI HHHHHCCCCCHHHHEEECCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCEEEE AQKTVVIPSQGAVYVLQLNADGLESDQGPLMDATHIIDEQTTITG EEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA