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The map label for this gene is yvdB [H]

Identifier: 41410158

GI number: 41410158

Start: 4520787

End: 4522322

Strand: Reverse

Name: yvdB [H]

Synonym: MAP4060c

Alternate gene names: 41410158

Gene position: 4522322-4520787 (Counterclockwise)

Preceding gene: 41410159

Following gene: 41410155

Centisome position: 93.63

GC content: 70.96

Gene sequence:

>1536_bases
ATGCAAGACATTCAACGGGCGGACGATGCCCTGCCCACCGCGTCGCGCGCCGAGCGGTTGCGCGGCGTCATCCGGCACGA
CCTGCCCTCCTCGCTGGTGGTGTTCCTGGTGGCGCTGCCGCTGTCGCTGGGCATCGCGATCGCGTCCAACGCCCCGGTGC
TGGCCGGTCTGATCGCGGCCATCGTCGGCGGAATCGTCGTCGGCGCCCTGGGCGGATCGCCGCTGCAAGTCAGCGGCCCG
GCGGCCGGGCTGACCGTCGTGGTCGCCGGTCTGGTCTCCGACTTCGGTTGGGGCGTCACCTGTTTCATCACCGTCGCGGC
CGGAGCCGTGCAGGTTCTGTTGGGGCTCAGCCGGGTGGCGCGCGCCGCCCTGGCGATCTCGCCGGTGGTGGTGCACGCCA
TGCTGGCCGGCATCGGGATCACCATCGCCCTGCAGCAGACGCACGTGCTGCTGGGCGGGAAATCCAAGAGCACGGCCTGG
CACAACCTGATCGGCCTGCCGGGGCAGATCATCGGCGCGCACCGGCCCGGGGTGCTGCTGGGCGTGCTGGTGATCGTCAT
CCTGGTCGCCTGGCGCTGGGTTCCCGCCAAGGTGCGCCGCGTTCCCGGCCCGCTGGTCGCCATCGTGGCGGTGACGGTGA
TCTCGGTGGTCTTTCCCTTTCACGTGCGCCGGATCGACCTCGACGGGTCGCCGCTGGATGCGCTGCAGCTGCCCGACCTG
CCGCACGGCAACTGGAGCGGTGTCGCCGTCGGGGTGATCACCGTCGCGCTGATCGCCAGCGTCGAGAGCCTGCTGTCCGC
GGTGTCGGTCGACCGGATGCACAACGGGCCGCGCACCGACTTCAACCGCGAATTGGTGGGACAGGGCGCGGCCAACATGA
TCTCCGGCGCCGTCGGCGGGCTGCCGGTCACCGGGGTCATCGTGCGCAGCTCGACCAACGTCAACGCGGGCGCCCGATCC
CGCGCCTCGGCGATCATGCACGGCGTGTGGATCCTGCTGTTCACCATTCCGTTCGCCGGGCTGGTCGACGAGATCCCCAC
GGCCGCCCTGGCCGGGCTGCTCATCGTCATCGGCATCCAGCTGCTCAAGCCGGCGCACATCGAAACCGCAATGAAGCACG
GCGATCTCGCGGTGTACGTGGTGACGGCCGTCAGCGTCATCTTCCTCAACCTGCTGCACGGGGTGATGATCGGGCTGGCG
CTGGCCATCGCGCTGACCGGCTGGCGGGTGATCCGGGCCAAGATCGAGGCCGCCCAGCTCGACGGCGAGTGGCGGGTGAC
GATCGAGGGCGCGGCGTGCACCTTCCTGGCGCTGCCGAGGCTGACCCGGGTGCTGGCGTCGGTGCCGCGGGGCGCGACGG
TGACGGTGGCCATCGCGGTGCACTACCTCGATCACGCCGCCCACCAAGCGATCACCGACTGGCAGCGCCAGCAGGAGGCG
ACGGGCGGCACGGTGCGCATCGAGGGCGCCGTGGTGGCGACGGGCCGCCGCGACGAACCGCAGGTGGAAGCCGAAATGCC
CGGCGCCGCAGCGTAA

Upstream 100 bases:

>100_bases
TAATCCGCTGCACGCCAACCCGTTACGACGACGTAACTGGCCGCAAGACGGGGCGCATATCGGAACATCCCCCGCAAACT
CCTAACGAGGGACGGGACCG

Downstream 100 bases:

>100_bases
TTGGCCCGGCTCGTCGATCAGTCGACGTCGATCCTGATGTGTAATCGCTTGCCGCACACCTGCGCCAGCCGTTGCAGCAT
ATCGACCCGCGGCACCTCGG

Product: hypothetical protein

Products: CO2; H2O

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MQDIQRADDALPTASRAERLRGVIRHDLPSSLVVFLVALPLSLGIAIASNAPVLAGLIAAIVGGIVVGALGGSPLQVSGP
AAGLTVVVAGLVSDFGWGVTCFITVAAGAVQVLLGLSRVARAALAISPVVVHAMLAGIGITIALQQTHVLLGGKSKSTAW
HNLIGLPGQIIGAHRPGVLLGVLVIVILVAWRWVPAKVRRVPGPLVAIVAVTVISVVFPFHVRRIDLDGSPLDALQLPDL
PHGNWSGVAVGVITVALIASVESLLSAVSVDRMHNGPRTDFNRELVGQGAANMISGAVGGLPVTGVIVRSSTNVNAGARS
RASAIMHGVWILLFTIPFAGLVDEIPTAALAGLLIVIGIQLLKPAHIETAMKHGDLAVYVVTAVSVIFLNLLHGVMIGLA
LAIALTGWRVIRAKIEAAQLDGEWRVTIEGAACTFLALPRLTRVLASVPRGATVTVAIAVHYLDHAAHQAITDWQRQQEA
TGGTVRIEGAVVATGRRDEPQVEAEMPGAAA

Sequences:

>Translated_511_residues
MQDIQRADDALPTASRAERLRGVIRHDLPSSLVVFLVALPLSLGIAIASNAPVLAGLIAAIVGGIVVGALGGSPLQVSGP
AAGLTVVVAGLVSDFGWGVTCFITVAAGAVQVLLGLSRVARAALAISPVVVHAMLAGIGITIALQQTHVLLGGKSKSTAW
HNLIGLPGQIIGAHRPGVLLGVLVIVILVAWRWVPAKVRRVPGPLVAIVAVTVISVVFPFHVRRIDLDGSPLDALQLPDL
PHGNWSGVAVGVITVALIASVESLLSAVSVDRMHNGPRTDFNRELVGQGAANMISGAVGGLPVTGVIVRSSTNVNAGARS
RASAIMHGVWILLFTIPFAGLVDEIPTAALAGLLIVIGIQLLKPAHIETAMKHGDLAVYVVTAVSVIFLNLLHGVMIGLA
LAIALTGWRVIRAKIEAAQLDGEWRVTIEGAACTFLALPRLTRVLASVPRGATVTVAIAVHYLDHAAHQAITDWQRQQEA
TGGTVRIEGAVVATGRRDEPQVEAEMPGAAA
>Mature_511_residues
MQDIQRADDALPTASRAERLRGVIRHDLPSSLVVFLVALPLSLGIAIASNAPVLAGLIAAIVGGIVVGALGGSPLQVSGP
AAGLTVVVAGLVSDFGWGVTCFITVAAGAVQVLLGLSRVARAALAISPVVVHAMLAGIGITIALQQTHVLLGGKSKSTAW
HNLIGLPGQIIGAHRPGVLLGVLVIVILVAWRWVPAKVRRVPGPLVAIVAVTVISVVFPFHVRRIDLDGSPLDALQLPDL
PHGNWSGVAVGVITVALIASVESLLSAVSVDRMHNGPRTDFNRELVGQGAANMISGAVGGLPVTGVIVRSSTNVNAGARS
RASAIMHGVWILLFTIPFAGLVDEIPTAALAGLLIVIGIQLLKPAHIETAMKHGDLAVYVVTAVSVIFLNLLHGVMIGLA
LAIALTGWRVIRAKIEAAQLDGEWRVTIEGAACTFLALPRLTRVLASVPRGATVTVAIAVHYLDHAAHQAITDWQRQQEA
TGGTVRIEGAVVATGRRDEPQVEAEMPGAAA

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Escherichia coli, GI87081859, Length=435, Percent_Identity=30.3448275862069, Blast_Score=114, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6325260, Length=420, Percent_Identity=24.047619047619, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24649801, Length=444, Percent_Identity=23.8738738738739, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85815873, Length=474, Percent_Identity=21.0970464135021, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: 4.2.1.1

Molecular weight: Translated: 52789; Mature: 52789

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDIQRADDALPTASRAERLRGVIRHDLPSSLVVFLVALPLSLGIAIASNAPVLAGLIAA
CCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHH
IVGGIVVGALGGSPLQVSGPAAGLTVVVAGLVSDFGWGVTCFITVAAGAVQVLLGLSRVA
HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RAALAISPVVVHAMLAGIGITIALQQTHVLLGGKSKSTAWHNLIGLPGQIIGAHRPGVLL
HHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCHHHHHHCCCCHHCCCCCCHHHH
GVLVIVILVAWRWVPAKVRRVPGPLVAIVAVTVISVVFPFHVRRIDLDGSPLDALQLPDL
HHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCC
PHGNWSGVAVGVITVALIASVESLLSAVSVDRMHNGPRTDFNRELVGQGAANMISGAVGG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHCCCC
LPVTGVIVRSSTNVNAGARSRASAIMHGVWILLFTIPFAGLVDEIPTAALAGLLIVIGIQ
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKPAHIETAMKHGDLAVYVVTAVSVIFLNLLHGVMIGLALAIALTGWRVIRAKIEAAQL
HHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGEWRVTIEGAACTFLALPRLTRVLASVPRGATVTVAIAVHYLDHAAHQAITDWQRQQEA
CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHC
TGGTVRIEGAVVATGRRDEPQVEAEMPGAAA
CCCEEEEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQDIQRADDALPTASRAERLRGVIRHDLPSSLVVFLVALPLSLGIAIASNAPVLAGLIAA
CCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHH
IVGGIVVGALGGSPLQVSGPAAGLTVVVAGLVSDFGWGVTCFITVAAGAVQVLLGLSRVA
HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RAALAISPVVVHAMLAGIGITIALQQTHVLLGGKSKSTAWHNLIGLPGQIIGAHRPGVLL
HHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCHHHHHHCCCCHHCCCCCCHHHH
GVLVIVILVAWRWVPAKVRRVPGPLVAIVAVTVISVVFPFHVRRIDLDGSPLDALQLPDL
HHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCC
PHGNWSGVAVGVITVALIASVESLLSAVSVDRMHNGPRTDFNRELVGQGAANMISGAVGG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHCCCC
LPVTGVIVRSSTNVNAGARSRASAIMHGVWILLFTIPFAGLVDEIPTAALAGLLIVIGIQ
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKPAHIETAMKHGDLAVYVVTAVSVIFLNLLHGVMIGLALAIALTGWRVIRAKIEAAQL
HHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGEWRVTIEGAACTFLALPRLTRVLASVPRGATVTVAIAVHYLDHAAHQAITDWQRQQEA
CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHC
TGGTVRIEGAVVATGRRDEPQVEAEMPGAAA
CCCEEEEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2CO3

Specific reaction: H2CO3 = CO2 + H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]