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The map label for this gene is ydbC [H]

Identifier: 41410144

GI number: 41410144

Start: 4505461

End: 4506381

Strand: Reverse

Name: ydbC [H]

Synonym: MAP4046c

Alternate gene names: 41410144

Gene position: 4506381-4505461 (Counterclockwise)

Preceding gene: 41410146

Following gene: 41410143

Centisome position: 93.3

GC content: 71.55

Gene sequence:

>921_bases
ATGACAGACAAACCACGCCCCGGCGGTATCGGCGATCTCGGCGGCCTGCCCGTCGCGCGCGTCGGCTACGGCGCCATGCA
GCTGTTCGACACGTCGCCCGACGAGGCGGCCGCGGTGCTGCGCCGCGCCGTCGAACTCGGCGTCAACCACATCGACACGG
CGTCGTTCTACGGCCCCGGCGAGGTGAACCGGCGCGTCCGGGCCGCGCTGGCCCCCTACCCCGACGACCTCGTCATCGTC
AGCAAGGTCGGCGCCCGTTACACGGGCGAGCAGCCGATTCCGCTGGCCTCCGCGCAACGACCCGCCGAGCTGCGCGCCGC
CGTCGAGGACGACCTGAGCCAGCTCGGCCTGGACCGCATCCCGGTGGTCAATCTGCGGCGGATGGACCTCGGCCCCAGCG
CGGCCGCCGGCGGCGACCAGGACGTCGACCTCGACGACCAGCTTGCCGAGATGATCGCCCTGCGCGACGAGGGCAAGATC
GGCGGCATCGGGATCAGCAGTGTGCCGCTCGAGGTGCTGCGGCGCGCCCTGCCCGCCGGCATCGTATGCGTGCAGAACGC
CTACAGCCTGCTGGACCGCTCCCAGGAGGCGATGGTCGACGTCTGCGCGGCCGAGGGGATCGCATGGGTTCCGTATTTCC
CGCTGGGGTCGGCGTTCCCGGGTCTGCCGAAGGTCACCGACAACGCCGTCGTGGTGGACATCGCGGGCGAACTCGGGGTC
ACACCGGCACAAGTCGGGTTGGCCTGGATCCTGGCGCGCGCCCCCCACACGTTGCTGATCCCGGGCACTCGATCGATCAC
CCATCTCGAGGAGAACATGGGCGCGGCCGGCGTCACGCTGAGCGCCGAGGCGATCGCCCGGCTCGACGCCGTCGGCTCGG
CGGCGGGCCATGACTACGCTGTCACGGGTGGGCACCAGTGA

Upstream 100 bases:

>100_bases
CCTTCCAACCAAAGCGGAGGATCCTCCGTTTCTGCTAGGCTGCGAATGCGGAGGGCCCTCCGCATTCTCCAGTGTCTCAC
CGCATCCTTCAGGAGCCACC

Downstream 100 bases:

>100_bases
ACACGTCCGGCCACCCTGGTGGCTGAAGCCGGCCAACAAGCTCTTCATCAGACTGTCGCGGCTGGGACTGAGTTTCGGCG
GCGAGAGCCCGGTCGTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTDKPRPGGIGDLGGLPVARVGYGAMQLFDTSPDEAAAVLRRAVELGVNHIDTASFYGPGEVNRRVRAALAPYPDDLVIV
SKVGARYTGEQPIPLASAQRPAELRAAVEDDLSQLGLDRIPVVNLRRMDLGPSAAAGGDQDVDLDDQLAEMIALRDEGKI
GGIGISSVPLEVLRRALPAGIVCVQNAYSLLDRSQEAMVDVCAAEGIAWVPYFPLGSAFPGLPKVTDNAVVVDIAGELGV
TPAQVGLAWILARAPHTLLIPGTRSITHLEENMGAAGVTLSAEAIARLDAVGSAAGHDYAVTGGHQ

Sequences:

>Translated_306_residues
MTDKPRPGGIGDLGGLPVARVGYGAMQLFDTSPDEAAAVLRRAVELGVNHIDTASFYGPGEVNRRVRAALAPYPDDLVIV
SKVGARYTGEQPIPLASAQRPAELRAAVEDDLSQLGLDRIPVVNLRRMDLGPSAAAGGDQDVDLDDQLAEMIALRDEGKI
GGIGISSVPLEVLRRALPAGIVCVQNAYSLLDRSQEAMVDVCAAEGIAWVPYFPLGSAFPGLPKVTDNAVVVDIAGELGV
TPAQVGLAWILARAPHTLLIPGTRSITHLEENMGAAGVTLSAEAIARLDAVGSAAGHDYAVTGGHQ
>Mature_305_residues
TDKPRPGGIGDLGGLPVARVGYGAMQLFDTSPDEAAAVLRRAVELGVNHIDTASFYGPGEVNRRVRAALAPYPDDLVIVS
KVGARYTGEQPIPLASAQRPAELRAAVEDDLSQLGLDRIPVVNLRRMDLGPSAAAGGDQDVDLDDQLAEMIALRDEGKIG
GIGISSVPLEVLRRALPAGIVCVQNAYSLLDRSQEAMVDVCAAEGIAWVPYFPLGSAFPGLPKVTDNAVVVDIAGELGVT
PAQVGLAWILARAPHTLLIPGTRSITHLEENMGAAGVTLSAEAIARLDAVGSAAGHDYAVTGGHQ

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=287, Percent_Identity=47.3867595818815, Blast_Score=216, Evalue=1e-57,
Organism=Escherichia coli, GI87081735, Length=318, Percent_Identity=27.6729559748428, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789375, Length=296, Percent_Identity=25.3378378378378, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788081, Length=257, Percent_Identity=28.7937743190661, Blast_Score=70, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17537077, Length=304, Percent_Identity=27.6315789473684, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24644950, Length=309, Percent_Identity=28.1553398058252, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24646155, Length=203, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31831; Mature: 31699

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKPRPGGIGDLGGLPVARVGYGAMQLFDTSPDEAAAVLRRAVELGVNHIDTASFYGPG
CCCCCCCCCCCCCCCCCHHHHCCCHHEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCH
EVNRRVRAALAPYPDDLVIVSKVGARYTGEQPIPLASAQRPAELRAAVEDDLSQLGLDRI
HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PVVNLRRMDLGPSAAAGGDQDVDLDDQLAEMIALRDEGKIGGIGISSVPLEVLRRALPAG
CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
IVCVQNAYSLLDRSQEAMVDVCAAEGIAWVPYFPLGSAFPGLPKVTDNAVVVDIAGELGV
EEHHHHHHHHHHCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
TPAQVGLAWILARAPHTLLIPGTRSITHLEENMGAAGVTLSAEAIARLDAVGSAAGHDYA
CHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCEE
VTGGHQ
ECCCCC
>Mature Secondary Structure 
TDKPRPGGIGDLGGLPVARVGYGAMQLFDTSPDEAAAVLRRAVELGVNHIDTASFYGPG
CCCCCCCCCCCCCCCCHHHHCCCHHEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCH
EVNRRVRAALAPYPDDLVIVSKVGARYTGEQPIPLASAQRPAELRAAVEDDLSQLGLDRI
HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PVVNLRRMDLGPSAAAGGDQDVDLDDQLAEMIALRDEGKIGGIGISSVPLEVLRRALPAG
CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
IVCVQNAYSLLDRSQEAMVDVCAAEGIAWVPYFPLGSAFPGLPKVTDNAVVVDIAGELGV
EEHHHHHHHHHHCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
TPAQVGLAWILARAPHTLLIPGTRSITHLEENMGAAGVTLSAEAIARLDAVGSAAGHDYA
CHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCEE
VTGGHQ
ECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]