Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
---|---|
Accession | NC_002944 |
Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41410143
Identifier: 41410143
GI number: 41410143
Start: 4505019
End: 4505189
Strand: Reverse
Name: 41410143
Synonym: MAP4045c
Alternate gene names: NA
Gene position: 4505189-4505019 (Counterclockwise)
Preceding gene: 41410144
Following gene: 41410142
Centisome position: 93.28
GC content: 74.27
Gene sequence:
>171_bases ATGACCGAGCTGTCGGCGGCTGAGGCGCGGCCGGTCCTGCGCGCCTTCCCCACCGAGGTGCCCACCGGCGTCGGTTTCAT GAAGCGGGCGGGACTGGTCACCGACGGGCGGCCCGAGGAGTTCGAGGCGCTGGCCGGCCGCTGCGCGGTGTTCCGGCTGG ACCCCGCGTAA
Upstream 100 bases:
>100_bases CTACGTCGTGGCCGGTTTTCCCGGCGCCGACTGGGTGGCCAACGCCCGCGCCGCCAAACAGGCGACCATCGCGCGCGGCC GCCACGTCGAGCGGGTGCGG
Downstream 100 bases:
>100_bases TCCGATGAGCGACAACCCTTTTGATTCCGGCCAGTGGCAACCCGTGGCCGGCTTCGACGACCTGACCGACATCACCTATC ACCGGCACGTCGACGACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MTELSAAEARPVLRAFPTEVPTGVGFMKRAGLVTDGRPEEFEALAGRCAVFRLDPA
Sequences:
>Translated_56_residues MTELSAAEARPVLRAFPTEVPTGVGFMKRAGLVTDGRPEEFEALAGRCAVFRLDPA >Mature_55_residues TELSAAEARPVLRAFPTEVPTGVGFMKRAGLVTDGRPEEFEALAGRCAVFRLDPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6006; Mature: 5875
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELSAAEARPVLRAFPTEVPTGVGFMKRAGLVTDGRPEEFEALAGRCAVFRLDPA CCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCEEEEEECCC >Mature Secondary Structure TELSAAEARPVLRAFPTEVPTGVGFMKRAGLVTDGRPEEFEALAGRCAVFRLDPA CCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA