Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410140
Identifier: 41410140
GI number: 41410140
Start: 4502623
End: 4503030
Strand: Reverse
Name: 41410140
Synonym: MAP4042c
Alternate gene names: NA
Gene position: 4503030-4502623 (Counterclockwise)
Preceding gene: 41410141
Following gene: 41410139
Centisome position: 93.23
GC content: 70.1
Gene sequence:
>408_bases ATGGAGATCCTGGCCAGCCGGATGCTGCTCCGGCCGGCGGACTATCAGCAGTCGTTGACGTTCTACCGCGACCGGATCGG CCTGGCGATAGCCCGCGAATACAGCGGCGGCACAGTCTTTTTCGCGGGGCAGTCGCTGCTGGAACTGGCCGGTTACGGCG CCCCGGACCACTCCGGCGGCCCGTTTCCCGGCGCGCTGTGGCTGCAGGTCCGCGACCTCGAGGCCACCCAGGCCGAGCTG CGCGGGCGCGGGGTGGCCATCGCCCGCGAGGCGCGCCAGGAGCCGTGGGGCCTGCACGAGATGCACGTCGTCGACCCGGA CGGCATCACGCTCATCTTCATCCAGATCCCCGCAGATCACCCGCTGCGCCGCGACACCCGAGGTGAACGGCAAGCGAAGC CCGGTTAA
Upstream 100 bases:
>100_bases CTTCGGCCCGCGCTGGGTCAACGCCGTCATGCAGCGCCAGACCGTCCAGCCCAACCGCGAAGCCGGGGCCTGATTCGACG CGTGTGATAGACACGAGGCT
Downstream 100 bases:
>100_bases CTGAGAGGTAACATCTGGCGACGACTCAAGGTACACCCGCGTTTCGGGTCATGCCGCATTCGACAATGGATTGCCCCTAC CACCAGAATCAGGCGCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase; Glyoxylase; Glyoxalase Family Protein; Lactoylglutathione Lyase
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MEILASRMLLRPADYQQSLTFYRDRIGLAIAREYSGGTVFFAGQSLLELAGYGAPDHSGGPFPGALWLQVRDLEATQAEL RGRGVAIAREARQEPWGLHEMHVVDPDGITLIFIQIPADHPLRRDTRGERQAKPG
Sequences:
>Translated_135_residues MEILASRMLLRPADYQQSLTFYRDRIGLAIAREYSGGTVFFAGQSLLELAGYGAPDHSGGPFPGALWLQVRDLEATQAEL RGRGVAIAREARQEPWGLHEMHVVDPDGITLIFIQIPADHPLRRDTRGERQAKPG >Mature_135_residues MEILASRMLLRPADYQQSLTFYRDRIGLAIAREYSGGTVFFAGQSLLELAGYGAPDHSGGPFPGALWLQVRDLEATQAEL RGRGVAIAREARQEPWGLHEMHVVDPDGITLIFIQIPADHPLRRDTRGERQAKPG
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14979; Mature: 14979
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEILASRMLLRPADYQQSLTFYRDRIGLAIAREYSGGTVFFAGQSLLELAGYGAPDHSGG CCCHHHHHHCCCCCHHHHHHHHHHHHCEEEEEECCCCEEEEECHHHHHHHCCCCCCCCCC PFPGALWLQVRDLEATQAELRGRGVAIAREARQEPWGLHEMHVVDPDGITLIFIQIPADH CCCCEEEEEEECCCHHHHHHCCCCEEEEHHHCCCCCCCCEEEEECCCCEEEEEEEECCCC PLRRDTRGERQAKPG CCCCCCCCCCCCCCC >Mature Secondary Structure MEILASRMLLRPADYQQSLTFYRDRIGLAIAREYSGGTVFFAGQSLLELAGYGAPDHSGG CCCHHHHHHCCCCCHHHHHHHHHHHHCEEEEEECCCCEEEEECHHHHHHHCCCCCCCCCC PFPGALWLQVRDLEATQAELRGRGVAIAREARQEPWGLHEMHVVDPDGITLIFIQIPADH CCCCEEEEEEECCCHHHHHHCCCCEEEEHHHCCCCCCCCEEEEECCCCEEEEEEEECCCC PLRRDTRGERQAKPG CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA