Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410138
Identifier: 41410138
GI number: 41410138
Start: 4500979
End: 4501287
Strand: Reverse
Name: 41410138
Synonym: MAP4040c
Alternate gene names: NA
Gene position: 4501287-4500979 (Counterclockwise)
Preceding gene: 41410139
Following gene: 41410137
Centisome position: 93.2
GC content: 69.58
Gene sequence:
>309_bases ATGAGCCACCTCGGCGACTGGTTCAACTACCAGGCCAGCCTGAAGATCCTGCTGTTCGCCATGCTGGCCGGCGCGGCGCT GCCGGGGCTGTTCGCCCTGGGCATCCGGCTGCAGTCGGCCGGGGCCGGTGACATCACCCTGGACGGCGCCGACGGCGGGC CCGCGCGGCGCAACCCGCTGCTGACCGGGCTGGCGTGGGCCATCTACGCGCTGGTCATCGCGGTGATCACGCTGGCTTTG CTCTACATCGCCCGGGACTTCATCGCCCACCACACCGGCTACCCGTTCCTCGGAGCCAAAGCCAAGTAG
Upstream 100 bases:
>100_bases GCGCCGACGACCACTCCCCGCCCCCGGACGCCGGGCCCCCGTTCGGCGGGCCGGGCGACCGGTACCAGTCCGACGACCCG ACGCTCAAGGCGAGCGCGTC
Downstream 100 bases:
>100_bases CATCGATAGGTGCCCACCGAGTTGCTAAGCCACACACCGGGGGGTGTTGTCAGAGCGTGAACGGATTTCTCAGTTCGATC GTCTCCTGGCTCCGCGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSHLGDWFNYQASLKILLFAMLAGAALPGLFALGIRLQSAGAGDITLDGADGGPARRNPLLTGLAWAIYALVIAVITLAL LYIARDFIAHHTGYPFLGAKAK
Sequences:
>Translated_102_residues MSHLGDWFNYQASLKILLFAMLAGAALPGLFALGIRLQSAGAGDITLDGADGGPARRNPLLTGLAWAIYALVIAVITLAL LYIARDFIAHHTGYPFLGAKAK >Mature_101_residues SHLGDWFNYQASLKILLFAMLAGAALPGLFALGIRLQSAGAGDITLDGADGGPARRNPLLTGLAWAIYALVIAVITLALL YIARDFIAHHTGYPFLGAKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10752; Mature: 10621
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLGDWFNYQASLKILLFAMLAGAALPGLFALGIRLQSAGAGDITLDGADGGPARRNPL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHH LTGLAWAIYALVIAVITLALLYIARDFIAHHTGYPFLGAKAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SHLGDWFNYQASLKILLFAMLAGAALPGLFALGIRLQSAGAGDITLDGADGGPARRNPL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHH LTGLAWAIYALVIAVITLALLYIARDFIAHHTGYPFLGAKAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA