Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410135
Identifier: 41410135
GI number: 41410135
Start: 4498072
End: 4499448
Strand: Reverse
Name: 41410135
Synonym: MAP4037c
Alternate gene names: NA
Gene position: 4499448-4498072 (Counterclockwise)
Preceding gene: 41410136
Following gene: 41410131
Centisome position: 93.16
GC content: 74.15
Gene sequence:
>1377_bases GTGAGAATCGCTCGGCGGGACGCGGTGGCGGCCGCGGTCGGGGCGGCGTTGGTGGCGGCGGCGTTCCTGCTGCCGCGGCT GAACCTCGGGGTGCGGCAGCGGCTGGACGTCGGCCCGGAGCGATTCGCCACCCACGCCGGGGCCGCGCCGATCTTCGGTG AGTGGCTGATCCACGCCGGCTGGGGAACCGGCCCGGCCGTCGCCCTCGCGGCCGCGGTCGTGGCCTGGGGACCCGTTCTG GCGCAACGGCTTTCGTGGTGGGCGTTGACGCTGGGCAGCTGGGCCGTCGCGGCCGGCTGGGCGTTCGCGCTGGCGATGAT CGACGGCTGGCAGCGCGGCTTCGCCGGCCGGCTGACCACCCGGGACGAATACCTGTGGGAGGTGCCGGGGATCCACGACA TCGCGGCGGCGGTGCGCACGTTTTCCAGCCGGATCGTCGACTACCAGCCGCACTCGTGGACCACGCACGTGTCCGGGCAT CCGCCGGGCGCGCTGCTGACCTTCGTCTGGCTGGACCGGCTGGGGCTGCACGGCGGCGGCTGGGCCGGGTTGCTGTGCCT ACTGGCCGGATCCAGCGCGGCCGCCGCGGTGCTGATCGGGGTGCGGGCGCTGGCCGACGAGCCGACCGCGCGGCGGGCCG CCCCGTTCGTCGCGCTGGCGCCCACCGCCATCTGGGTGGCGGTCTCGGCCGATGGGTACTTCGCCGGGGTGGCGGCGTGG GGCATCGCGCTGCTGGCCGTGGCGGTGCACCGTCCGGTGCGGTTCCCGGCGCTGACCGCCGCCGGCGCCGGGCTGCTGCT GGGCTGGGGGGTGTTCTGCAACTACGGCCTGATGCTGATGGGACTGCCGGCGGCGGCGGTGCTTGCCGCGGCCCCCCGGC TACCCCGCGACGGCCGGACGCAGTGGCGTGCGGTGCTGCGGGCGCTGGGCCCCGCGGCGCTGGGCGCGATCGCGGTGGCG GTCGCCTTCGCCGTCGCCGGGTTCTACTGGTTCGACGGCTATACCCTTGTGCAGCAACGCTATTGGCAGGGCATCGCCAA AGACCGGCCGTTCCAATACTGGAGCTGGGCCAACCTGGCCTGCGTGGTGTGCGCGATCGGTTTGGGCGGCGTCGCCGGGG TCGGCCGGGTGTTCGACCGGGCCGCGATCCGCCGGCGCAGCGGTTTCCCGTTGCTGCTGCTGGCGGTGCTGGCCGCCATC GCCTGCGCGGACCTGAGCATGCTCAGCAAGGCCGAGGTGGAACGCATCTGGCTGCCGTTCACCATCTGGCTCACCGCGGC CGCCGCGCTGCTGCCGGTGCGGACGCATCGAATCTGGTTGGCGCTCAACGCCGTCGGCGCCCTGGCGGTCAACACGATCA TCCTCACGCACTGGTAG
Upstream 100 bases:
>100_bases ACGTTGTCGCCGCGCTGCCGCGCCGGGGCATCGGCAAGGTGGACCGGGCGGCGTTGGTGCGCCGATTCGCCGGGGGCGGC GAACAATAGGCTGTTGCTCC
Downstream 100 bases:
>100_bases CGCCGTACTTACAGGCCGGCCGCCCGGGTGGCCCGGGCGAACCGGCTGGCGGGCGGGCAGGCGTCGCGCACCACCGCGAC ATCGCCAACGACGTCGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MRIARRDAVAAAVGAALVAAAFLLPRLNLGVRQRLDVGPERFATHAGAAPIFGEWLIHAGWGTGPAVALAAAVVAWGPVL AQRLSWWALTLGSWAVAAGWAFALAMIDGWQRGFAGRLTTRDEYLWEVPGIHDIAAAVRTFSSRIVDYQPHSWTTHVSGH PPGALLTFVWLDRLGLHGGGWAGLLCLLAGSSAAAAVLIGVRALADEPTARRAAPFVALAPTAIWVAVSADGYFAGVAAW GIALLAVAVHRPVRFPALTAAGAGLLLGWGVFCNYGLMLMGLPAAAVLAAAPRLPRDGRTQWRAVLRALGPAALGAIAVA VAFAVAGFYWFDGYTLVQQRYWQGIAKDRPFQYWSWANLACVVCAIGLGGVAGVGRVFDRAAIRRRSGFPLLLLAVLAAI ACADLSMLSKAEVERIWLPFTIWLTAAAALLPVRTHRIWLALNAVGALAVNTIILTHW
Sequences:
>Translated_458_residues MRIARRDAVAAAVGAALVAAAFLLPRLNLGVRQRLDVGPERFATHAGAAPIFGEWLIHAGWGTGPAVALAAAVVAWGPVL AQRLSWWALTLGSWAVAAGWAFALAMIDGWQRGFAGRLTTRDEYLWEVPGIHDIAAAVRTFSSRIVDYQPHSWTTHVSGH PPGALLTFVWLDRLGLHGGGWAGLLCLLAGSSAAAAVLIGVRALADEPTARRAAPFVALAPTAIWVAVSADGYFAGVAAW GIALLAVAVHRPVRFPALTAAGAGLLLGWGVFCNYGLMLMGLPAAAVLAAAPRLPRDGRTQWRAVLRALGPAALGAIAVA VAFAVAGFYWFDGYTLVQQRYWQGIAKDRPFQYWSWANLACVVCAIGLGGVAGVGRVFDRAAIRRRSGFPLLLLAVLAAI ACADLSMLSKAEVERIWLPFTIWLTAAAALLPVRTHRIWLALNAVGALAVNTIILTHW >Mature_458_residues MRIARRDAVAAAVGAALVAAAFLLPRLNLGVRQRLDVGPERFATHAGAAPIFGEWLIHAGWGTGPAVALAAAVVAWGPVL AQRLSWWALTLGSWAVAAGWAFALAMIDGWQRGFAGRLTTRDEYLWEVPGIHDIAAAVRTFSSRIVDYQPHSWTTHVSGH PPGALLTFVWLDRLGLHGGGWAGLLCLLAGSSAAAAVLIGVRALADEPTARRAAPFVALAPTAIWVAVSADGYFAGVAAW GIALLAVAVHRPVRFPALTAAGAGLLLGWGVFCNYGLMLMGLPAAAVLAAAPRLPRDGRTQWRAVLRALGPAALGAIAVA VAFAVAGFYWFDGYTLVQQRYWQGIAKDRPFQYWSWANLACVVCAIGLGGVAGVGRVFDRAAIRRRSGFPLLLLAVLAAI ACADLSMLSKAEVERIWLPFTIWLTAAAALLPVRTHRIWLALNAVGALAVNTIILTHW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48503; Mature: 48503
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIARRDAVAAAVGAALVAAAFLLPRLNLGVRQRLDVGPERFATHAGAAPIFGEWLIHAG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCHHHHHHEECC WGTGPAVALAAAVVAWGPVLAQRLSWWALTLGSWAVAAGWAFALAMIDGWQRGFAGRLTT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC RDEYLWEVPGIHDIAAAVRTFSSRIVDYQPHSWTTHVSGHPPGALLTFVWLDRLGLHGGG CCCHHEECCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCC WAGLLCLLAGSSAAAAVLIGVRALADEPTARRAAPFVALAPTAIWVAVSADGYFAGVAAW HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCEEEECCCEEEEEEECCCCHHHHHHH GIALLAVAVHRPVRFPALTAAGAGLLLGWGVFCNYGLMLMGLPAAAVLAAAPRLPRDGRT HHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCCCCCHH QWRAVLRALGPAALGAIAVAVAFAVAGFYWFDGYTLVQQRYWQGIAKDRPFQYWSWANLA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHH CVVCAIGLGGVAGVGRVFDRAAIRRRSGFPLLLLAVLAAIACADLSMLSKAEVERIWLPF HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIWLTAAAALLPVRTHRIWLALNAVGALAVNTIILTHW HHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHEEEEECC >Mature Secondary Structure MRIARRDAVAAAVGAALVAAAFLLPRLNLGVRQRLDVGPERFATHAGAAPIFGEWLIHAG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCHHHHHHEECC WGTGPAVALAAAVVAWGPVLAQRLSWWALTLGSWAVAAGWAFALAMIDGWQRGFAGRLTT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC RDEYLWEVPGIHDIAAAVRTFSSRIVDYQPHSWTTHVSGHPPGALLTFVWLDRLGLHGGG CCCHHEECCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCC WAGLLCLLAGSSAAAAVLIGVRALADEPTARRAAPFVALAPTAIWVAVSADGYFAGVAAW HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCEEEECCCEEEEEEECCCCHHHHHHH GIALLAVAVHRPVRFPALTAAGAGLLLGWGVFCNYGLMLMGLPAAAVLAAAPRLPRDGRT HHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCCCCCHH QWRAVLRALGPAALGAIAVAVAFAVAGFYWFDGYTLVQQRYWQGIAKDRPFQYWSWANLA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHH CVVCAIGLGGVAGVGRVFDRAAIRRRSGFPLLLLAVLAAIACADLSMLSKAEVERIWLPF HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIWLTAAAALLPVRTHRIWLALNAVGALAVNTIILTHW HHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA